Gene Tpet_1153 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpet_1153 
Symbol 
ID5170151 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermotoga petrophila RKU-1 
KingdomBacteria 
Replicon accessionNC_009486 
Strand- 
Start bp1177074 
End bp1177694 
Gene Length621 bp 
Protein Length206 aa 
Translation table11 
GC content48% 
IMG OID640563672 
ProductABC transporter related 
Protein accessionYP_001244743 
Protein GI148270283 
COG category[V] Defense mechanisms 
COG ID[COG1131] ABC-type multidrug transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAAAAAAT CTTACGGGAA GAAGAAGGTT CTGGATGGAG TTTCGTTTTC TCTCGAGAAA 
GGAAAATCCC TCGGCATTGT TGGACAGAAT TCTGCGGGGA AGACCACTCT TTTGAAGATA 
CTCGCCACCA TCCTGAAACC GGACGAAGGA AGACTCTTTC TCTTCGAAAA AGACGCACTG 
AAGGACCTGT CGTACATTCG AAAGAGAATA GCCTTCGTTC CCGAGTTCCC TGCTCTGCTT 
GAAGAACTCA CAGTTCGTGA GAACCTTCTT TTCTTTTCCA GACTCAGAGG GGTGAAGATG 
GAAAGCTTCA TTGTCTCTGA GTTCATGCTG GAACCTTTCA TGGGAACCCT TGTTCGAAAC 
GCTTCAAAAG GCGTGAAACA GAGAACGGCT CTTGCAGCGG CTCTATTTGG AAACCCTGAA 
CTTCTGATCC TCGACGAGCC GACCAGCGGT CTCGACGTTG AATCGGCCAG CATCGTCAGG 
AGTAAACTGA AACGACTCAA AGAAGAAGGA ATCACGGTGA TAATATCTTC TCACATAAGG 
GAGGACATCG AAGAACTCTG CGACGAAATT CTGGTGATCA ACGGTGAGAG TGGGGGGAGC 
AATCTTGAAC GAGATCGTTA A
 
Protein sequence
MKKSYGKKKV LDGVSFSLEK GKSLGIVGQN SAGKTTLLKI LATILKPDEG RLFLFEKDAL 
KDLSYIRKRI AFVPEFPALL EELTVRENLL FFSRLRGVKM ESFIVSEFML EPFMGTLVRN 
ASKGVKQRTA LAAALFGNPE LLILDEPTSG LDVESASIVR SKLKRLKEEG ITVIISSHIR 
EDIEELCDEI LVINGESGGS NLERDR