| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpet_1150 |
|---|
| Symbol | |
|---|
| ID | 5170162 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermotoga petrophila RKU-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009486 |
|---|
| Strand | - |
|---|
| Start bp | 1174357 |
|---|
| End bp | 1174866 |
|---|
| Gene Length | 510 bp |
|---|
| Protein Length | 169 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 640563669 |
|---|
| Product | dihydrofolate reductase-like protein |
|---|
| Protein accession | YP_001244740 |
|---|
| Protein GI | 148270280 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0262] Dihydrofolate reductase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 45 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCAAAAG TGATTTTCGT TCTTGCGATG GACGTCTCCG GAAAAATAGC TTCCTCTGTT
GAAGGCTGGA ACTCATTTGA GGACAGAAAA AATTTCAGAG AGATCACCAC AGAGATCGGA
AACGTTGTGA TGGGAAGGGT CACATTCGAA GAAATAGGAA GACCTCTTCC AGAGAGGCTG
AACGTTGTTT TGACGAGAAG ACGCAGGTCT TCCAACGATC CTTCACTTGT TTTTTTCAAC
GGTTCACCTG GGGATGTGGT AAAATTCCTC GAAGGAAAAG GCTACGAAAA GGTGGCTGTC
ATAGGAGGAA AGACCGTGTT CACGGAATTT CTGAGAGAAA AACTGGTAGA TGAGCTTTTC
GTCACCGTCG AACCGTACGT GTTCGGGAAG GGAATACCTT TCTTCGATGA ATTCGAAGGT
TACTTTCCTT TGAAACTTCT GGAGATGAGG CGTTTGAACG AAAGAGGCAC ACTTTTTCTC
AAATATTCTG TAGAAAAATC GCACCGTTAG
|
|---|
| Protein sequence | MAKVIFVLAM DVSGKIASSV EGWNSFEDRK NFREITTEIG NVVMGRVTFE EIGRPLPERL
NVVLTRRRRS SNDPSLVFFN GSPGDVVKFL EGKGYEKVAV IGGKTVFTEF LREKLVDELF
VTVEPYVFGK GIPFFDEFEG YFPLKLLEMR RLNERGTLFL KYSVEKSHR
|
|---|
| |