| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpet_1141 |
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| Symbol | |
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| ID | 5170140 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermotoga petrophila RKU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009486 |
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| Strand | + |
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| Start bp | 1165438 |
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| End bp | 1166706 |
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| Gene Length | 1269 bp |
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| Protein Length | 422 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640563660 |
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| Product | alpha amylase, catalytic region |
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| Protein accession | YP_001244731 |
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| Protein GI | 148270271 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0366] Glycosidases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACTTCA AAAGACTGAT AATATACGAA GCCTTTGCAC GTGCTTATCC AGGAGAAAAA
GGAAAGAAGT TCGATTCCCT CATGAAAGAT CTTGAAAGAC TCAAAGGAAT GGGCATCAAC
ACAGTGTGGT TGATGCCCAT TCATCCTACT GGAATGGTGG AAAGAAAAGG TACTCTGGGA
TCCCCTTACG CCATACGCGA TTACTACGAG ATAGATCCAC TCATAGGAAC GAAAGATGGC
TTCAAAAGGT TCGTGAAGAG AGCTCACGAA TTGAACATGT ACGTTTTGAT GGACATGGTC
CTGAACCACG CGGCAGCTGA CAACGTCTTA GTCAAAGAAC ACCCTGAGTG GTTTCTCAGG
GATGAAAATG GAAATCCCAC AAGGAAAGTG CCAGACTGGA CGGACATAGT CGATTTTGAT
TATTCGAATG GAGAACTGAG GAAGTACATG ATCAACATGA TGAAGTACTG GGTTGAAGAG
TTTGACATCG ATGGATTCAG GTGCGATGTG GCAGGGCTTG TTCCACTGGA CTTCTGGCTG
CAGGTAAGGA AAGAACTCGA CCCCCTGAAG AGACTCATAT GGCTTTCTGA AACACACGAT
CCCTACATGT ACCAGGCTTT CGATATCACC TACGACTACG ATGGCTACTA CAAGTTCAGG
GATTTCATTG AGGGAAAAGG TAGCTTGAGG GAGTACGTGG ATTTCTTGAG GATGCAGGAT
CACATGTATC CCAGAGGTTA CATAAAGATG AGATTTCTGG AGAATCACGA CCAACCGAGG
ATCGCGAAAT TCATCGAAGA AGATTCGTTG ATCCAATGGA TAGCGTTTCT TTTCACCTTC
AAAGGGGTTC CTCTCGTTCA CAACGGACAG GAGTACGGTC TCAAGGAGGA CGTGGACATA
TTCAACGAAT ACACGTTACC GTTTCCTATG GAAGAGAACA GGATCTCAAT TCTTCACAGA
AAACTTGCCC ATTACAGATA CGGAACTGGT GTTTTCACCG AAGGAGAGAT GCTTTTTGTG
AAAAACGATC AACCAGAGAA GGTGATATCT TATCTCTGGA GATACGAAAA CAGGTACATT
CTCTGTGTAT TGAATCCTCT TCTTGAAAGC ACAAAGGTAA CTCTGGATTT CTCGGGTATT
TGGGAGAGTG CGTGTATCCA TTCGAAGAAC GTGTTCAACG ATGAGATTGT TCGAGTTCCC
GTGAAAAATT CCCGCGCGAC TGTTGAGGTA GGGAAAGAAC CTCTGATACT CTCTTTCGTG
CTCTACTGA
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| Protein sequence | MNFKRLIIYE AFARAYPGEK GKKFDSLMKD LERLKGMGIN TVWLMPIHPT GMVERKGTLG
SPYAIRDYYE IDPLIGTKDG FKRFVKRAHE LNMYVLMDMV LNHAAADNVL VKEHPEWFLR
DENGNPTRKV PDWTDIVDFD YSNGELRKYM INMMKYWVEE FDIDGFRCDV AGLVPLDFWL
QVRKELDPLK RLIWLSETHD PYMYQAFDIT YDYDGYYKFR DFIEGKGSLR EYVDFLRMQD
HMYPRGYIKM RFLENHDQPR IAKFIEEDSL IQWIAFLFTF KGVPLVHNGQ EYGLKEDVDI
FNEYTLPFPM EENRISILHR KLAHYRYGTG VFTEGEMLFV KNDQPEKVIS YLWRYENRYI
LCVLNPLLES TKVTLDFSGI WESACIHSKN VFNDEIVRVP VKNSRATVEV GKEPLILSFV
LY
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