| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpet_1138 |
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| Symbol | |
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| ID | 5170176 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermotoga petrophila RKU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009486 |
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| Strand | + |
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| Start bp | 1160423 |
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| End bp | 1161727 |
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| Gene Length | 1305 bp |
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| Protein Length | 434 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640563657 |
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| Product | pyrimidine-nucleoside phosphorylase |
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| Protein accession | YP_001244728 |
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| Protein GI | 148270268 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0213] Thymidine phosphorylase |
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| TIGRFAM ID | [TIGR02644] pyrimidine-nucleoside phosphorylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.000122674 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAGAGCTT ACGATGTGAT ACTCAAGAAG AGAAACGGGG AAAAACTTTC GAGAGAAGAG
ATAGAGTTCA TGGTTGGTGG ATATGTAAAA GGAGAGATTC CGGACTACCA GATGGCCGCT
TTTTTGATGG CTGTTTATTT TCGCCACCTC GACGAAGAGG AAACTTACTA TTTCACGGAG
ACGATGATGA GATCAGGAGA GGTGCTCGAT CTGTCGGAAA TACCGGGACC GAAGGTAGAC
AAACACTCGA CTGGGGGAGT TGGTGACAAA ACAACCCTGG TCGTGGCGCC TCTTGTGGCT
TCCGCTGGGG TACCTGTTGC CAAGATGTCT GGAAGGGCCC TGGGTCACAC AGGAGGAACC
ATCGACAAAC TGGAGTCGAT CCCTGGATTT CGAACAGAAC TTTCTCTCGA AGAATTCATT
GATAACGTTA AAAAGTATGG AATAGCGATC GTGGGTCAAA CAGGGAATCT TGTTCCCGCC
GACAAAAAGA TATACGCACT TCGTGACGCG ACAGCAACCG TCGACGAAAT TTCTCTGATC
GCCTCCAGTA TCATGAGTAA AAAACTCGCC GGTGGGAGCG ATGCTTTTGT TCTGGACGTG
AAGTTCGGAA CAGGCGCCTT CATGAAAGGG TTCGAAGACG CAAGAAAACT TGCCCTTCTC
ATGCTTAAAA TAGCCCAGCA ACATGGGAAG AAAGCGGCTG CCGTCCTCTC AAATATGGAT
CAACCCCTGG GAAGCGCTGT TGGAAATTCT TTGGAAGTGA TAGAGGCGAT AGAAACCTTG
AAAGGAAACG GTCCCGAGGA TTTGAAGGAT CTGTCGATTA CTCTGGGCGC TCTCATGCTG
GAACTCGCTG GAGTAGCAGA TTTTGACGAT GGAAAGAAGA TCTTGCAGAC AAAACTCGAG
ACCGGAGAAG CCTTGGAAAA GTTTCGAATC CTCGTTAAAG CTCAGGGTGG AGACGAAAGA
GTGGTGGACG ACCCGTGGAA AGTGCTCCCG GTTGCAGAAC AGGTGGTGGA ATTCTCTGCA
GAGAGAGAAG GCTATGTTTC AAAGATAGAC GCGGAGAAAG TAGGTATCGC ATCGATGGTG
CTCGGAGCAG GAAGGAAGAA GAAAGAAGAT CGAATCGATC ACAGAGTTGG AATCATCGTT
GAAAAGAAGA TAGGCGACTC TGTGAAAAAG GGAGAGACGA TAGCGAAACT TTTCGTGTCA
GACAGAAGTG ATGTTGAGAA TGCTTTGAAG CTTCTGAAAG AAGCGTATGT GATCTCTGAT
TCTCCTTCAA AGCCACCCAG AGTCGTCGAA GAGGTGATCA AATGA
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| Protein sequence | MRAYDVILKK RNGEKLSREE IEFMVGGYVK GEIPDYQMAA FLMAVYFRHL DEEETYYFTE
TMMRSGEVLD LSEIPGPKVD KHSTGGVGDK TTLVVAPLVA SAGVPVAKMS GRALGHTGGT
IDKLESIPGF RTELSLEEFI DNVKKYGIAI VGQTGNLVPA DKKIYALRDA TATVDEISLI
ASSIMSKKLA GGSDAFVLDV KFGTGAFMKG FEDARKLALL MLKIAQQHGK KAAAVLSNMD
QPLGSAVGNS LEVIEAIETL KGNGPEDLKD LSITLGALML ELAGVADFDD GKKILQTKLE
TGEALEKFRI LVKAQGGDER VVDDPWKVLP VAEQVVEFSA EREGYVSKID AEKVGIASMV
LGAGRKKKED RIDHRVGIIV EKKIGDSVKK GETIAKLFVS DRSDVENALK LLKEAYVISD
SPSKPPRVVE EVIK
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