Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tpet_1130 |
Symbol | |
ID | 5169986 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermotoga petrophila RKU-1 |
Kingdom | Bacteria |
Replicon accession | NC_009486 |
Strand | + |
Start bp | 1154288 |
End bp | 1154782 |
Gene Length | 495 bp |
Protein Length | 164 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 640563649 |
Product | peptide deformylase |
Protein accession | YP_001244720 |
Protein GI | 148270260 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0242] N-formylmethionyl-tRNA deformylase |
TIGRFAM ID | [TIGR00079] peptide deformylase |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.00000143546 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTACAGAA TAAGAGTCTT TGGGGATCCT GTTTTGAGAA AGAGGGCAAA ACCCGTCACG AAGTTCGACG ACAACCTGGA AAAGACCATA GAGAGAATGA TAGAGACAAT GTATCACTAC GACGGTGTGG GGCTTGCAGC GCCACAGGTT GGAATATCTC AGAGGTTCTT CGTCATGGAC GTTGGAAATG GCCCGGTTGC CGTGATAAAC CCTGAGATCC TTGAAATCGA TCCCGAAACC GAAGTGGCAG AGGAAGGATG TCTCAGCTTT CCCGAGATCT TCGTCGAGAT AGAAAGGAGC AAAAGAATAA AGGTCAGATA CCAGAACACG AAGGGAGAAT ACGTGGAAGA GGTGCTGGAA GGTTACGCTG CAAGGGTTTT TCAGCACGAG TTCGATCATC TGAACGGAGT TTTGATCATC GATCGAATCA GTCCAGCGAA GCGCCTTTTG CTCAGAAAGA AACTCATGGA CATAGCAAGA ACCGTTAAGA GATGA
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Protein sequence | MYRIRVFGDP VLRKRAKPVT KFDDNLEKTI ERMIETMYHY DGVGLAAPQV GISQRFFVMD VGNGPVAVIN PEILEIDPET EVAEEGCLSF PEIFVEIERS KRIKVRYQNT KGEYVEEVLE GYAARVFQHE FDHLNGVLII DRISPAKRLL LRKKLMDIAR TVKR
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