| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpet_1129 |
|---|
| Symbol | |
|---|
| ID | 5170166 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermotoga petrophila RKU-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009486 |
|---|
| Strand | + |
|---|
| Start bp | 1153545 |
|---|
| End bp | 1154288 |
|---|
| Gene Length | 744 bp |
|---|
| Protein Length | 247 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 640563648 |
|---|
| Product | stationary phase survival protein SurE |
|---|
| Protein accession | YP_001244719 |
|---|
| Protein GI | 148270259 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0496] Predicted acid phosphatase |
|---|
| TIGRFAM ID | [TIGR00087] 5'/3'-nucleotidase SurE |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.000000434367 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGAATTC TGGTAACCAA TGACGACGGG ATACAGTCTA AGGGGATCAT TATCCTCGCA
GAGCTTCTTT CTGAGGAACA CGATGTGTTC GTGGTGGCTC CCGATAAAGA GAGGAGCGCA
ACAGGTCACA GTATCACCAT ACATGTTCCG CTCTGGATAA AGAAGGTTTT CATCTCAGAG
AGGGTGGTTG CGTACTCCAC CACGGGAACA CCCGCGGACT GTGTAAAGCT CGCTTACAAC
GTGATCATGG ATAAAAAGGT CGATCTCATC GTGAGTGGTG TGAACAGGGG ACCCAACATG
GGTATGGATA TTCTCTACTC TGGAACGGTC TCAGGTGCGA TGGAAGGTGC CATGATGAAC
ATTCCATCGA TTGCCATATC GAGTGCGAAC TACGAGAGTC CTGATTTCGA AGGGGCGGCG
CGTTTTCTGA TCGACTTTCT GAAAGAATTC GACTTCTCAC TCCTCGATCC CTTCACCATG
CTGAACATAA ACGTTCCCGC TGGTGAGATA AAGGGATGGA AATTCACAAG ACAGAGCAGA
AGAAGGTGGA ACGATTACTT CGAAGAGAGA GTCTCACCTT TTGGGGAGAA GTACTATTGG
ATGATGGGAG AGGTCATCGA AGACGACGAT AGAGATGACG TTGACTACAA AGCTGTTAGA
GAAGGGTACG TCTCCATCAC TCCGATACAT CCCTTCCTCA CGAACGAACG GTGTCTGAAG
AAGTTAAGGG AGGTGTACGA TTGA
|
|---|
| Protein sequence | MRILVTNDDG IQSKGIIILA ELLSEEHDVF VVAPDKERSA TGHSITIHVP LWIKKVFISE
RVVAYSTTGT PADCVKLAYN VIMDKKVDLI VSGVNRGPNM GMDILYSGTV SGAMEGAMMN
IPSIAISSAN YESPDFEGAA RFLIDFLKEF DFSLLDPFTM LNINVPAGEI KGWKFTRQSR
RRWNDYFEER VSPFGEKYYW MMGEVIEDDD RDDVDYKAVR EGYVSITPIH PFLTNERCLK
KLREVYD
|
|---|
| |