Gene Tpet_1127 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpet_1127 
Symbol 
ID5169955 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermotoga petrophila RKU-1 
KingdomBacteria 
Replicon accessionNC_009486 
Strand+ 
Start bp1152193 
End bp1152825 
Gene Length633 bp 
Protein Length210 aa 
Translation table11 
GC content46% 
IMG OID640563646 
Productmethyltransferase small 
Protein accessionYP_001244717 
Protein GI148270257 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG2813] 16S RNA G1207 methylase RsmC 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones4 
Plasmid unclonability p-value0.00000198355 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTGAAA AATTCGAACA CTACTACACG GTGGAACCCA CATCGAAGCT GAAGGTCAGA 
AATGCGAAAC TCGTCCTGAA GAACGGTCAT GAATACATCT TCAAAACACC TTCCGGTGTG 
TATTCTTACG GAAAAATAGA CAAAGCCACA CAGGTGCTCC TTGAAAACCT GAAAGTCCAC 
GGAAAGAAAG TGCTCGATCT TGGGTGTGGA TACGGTGTGG TAGGAATCGT TTTAAAAAAG 
GAATATCCAG ATCTTGAAGT TTATATGAGC GACATAAACA AGCGCGCGGT GGAATTCGCC 
AAGATAAACG CGAAGGATCA CAACGTTGAG GTCGACATAA GGTGGGGAAA TCTTTATGAG 
CCATGGGAAG GTATGAAGTT CGATATGATC GTGTGCAATC CTCCAGTCGT TGCAGGAAAG 
AAAGTCTGGA TGGAGATAGT GAGAAAGGCT CCCGAGTTTC TTGAAGAAGG TGGCAGCCTT 
CAGGTCGTCG CTTACCACAA CAAAGGGGGC AGAAGGATCA GAGATTTCAT GGAGGAGATT 
TTCGGGAACG TGGAGGAACT CTGCAAGACC GGTGGAATAA GAGTGTACAG ATCCGTGAAG 
GGATTGAAAG AGGATGAAGA TAACGCTGAA TAA
 
Protein sequence
MSEKFEHYYT VEPTSKLKVR NAKLVLKNGH EYIFKTPSGV YSYGKIDKAT QVLLENLKVH 
GKKVLDLGCG YGVVGIVLKK EYPDLEVYMS DINKRAVEFA KINAKDHNVE VDIRWGNLYE 
PWEGMKFDMI VCNPPVVAGK KVWMEIVRKA PEFLEEGGSL QVVAYHNKGG RRIRDFMEEI 
FGNVEELCKT GGIRVYRSVK GLKEDEDNAE