| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpet_1125 |
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| Symbol | |
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| ID | 5170245 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermotoga petrophila RKU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009486 |
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| Strand | + |
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| Start bp | 1150453 |
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| End bp | 1151643 |
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| Gene Length | 1191 bp |
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| Protein Length | 396 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640563644 |
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| Product | diaminopimelate aminotransferase |
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| Protein accession | YP_001244715 |
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| Protein GI | 148270255 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0624] Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases |
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| TIGRFAM ID | [TIGR01910] acetylornithine deacetylase or succinyl-diaminopimelate desuccinylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.000017221 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAGATCA CAAAAAGAAT AGAAGAACTC GGAGAAGAAA TGGTGGAGTC CCTGAAAAAA
TTCATCTCCA TCAATTCGGT GAATCCCGCC TTTGGAGGCC CAGGAGAGAA AGAAAAGGCC
GACTGGCTCG AAGAACTCCT CAGGGGTTTC GGTTTCGAAG TCGATCGCTA CGACGTGAAA
GACGATAAAG GTATGTGGCG ATCGAACGTT GTGGCAAAGA TTCCAGGGAA AAACAGAGAG
AAAACGCTCT GGATCGTAAC TCACATCGAC ACCGTACCAC CGGGGGATCT TTCTTTGTGG
GAAACGGATC CCTTCGTGCC TGTTGTGAAA GATGGAAAGG TGTACGGCAG AGGTGCCGAG
GACAACGGGG GATCCATGAT AGCCTCCATA TACGCTGGGA AGGTCCTCAT CGACCTTGGT
ATCGTTCCCG AATATAACTT CGGTCTTGCG CTCGTCGCCG ACGAGGAGGC GGGAAGCAGG
TACGGGATCC AGTATCTAAT AGAAAAGGGG TTGTTCAGAT CAGAAGACAT GTTCCTGGTT
CCGGATGCAG GAAACGAAAA GGGGAACTTC ATAGAGATCG CCGAGAAGAG CATTCTATGG
TTCAAAGTGA CGGTGAATGG AAAGCAAGGG CATGCTTCAA GGCCGAGGAC AACGGAGAAC
GCACTCAGAA AAGGAGCACA GCTCATAACG GAGATAGATG AAACGCTTCA CAGGAAATAC
CCCGATAGAG ACGAACTCTT CGATGAACCA CTCAGCACGT TCGAGCCCAC TCGCACTGAA
AAAACTGTGG ACAACGTGAA CACTGTTCCC GGCAGATTCG TCTTTTACTT CGACTGTAGA
GTTCTGCCTC GCTACGATCT CGACGAAATA CTATCCACCG TCGAGTCGAT TCTCGATGGA
AGAGGCGCTG AGCTGGAGGT TGTTGTAAAA CAGCCTGCAC CCGAGCCAAC TCCGCCTGAT
TCAGAACTCG TGGCAAAACT TTCCAGTGCT TTGGGAAGTC TAAGAGGCCT GGAAGCGAAG
GTGGGAGGAA TAGGTGGGGG CACCTGCGCC GCGTTCTTCA GAAAGAAAGG TTGGCCCGCT
GTCGTCTGGA GCACGATAGA TGGGACTGCT CATCAACCCA ACGAATACCG AAGGATCTCG
CACATGGTAG AAGACGCAAA GGTGTTCGCA TTGCTCGGAA TTGAGAGGTG A
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| Protein sequence | MEITKRIEEL GEEMVESLKK FISINSVNPA FGGPGEKEKA DWLEELLRGF GFEVDRYDVK
DDKGMWRSNV VAKIPGKNRE KTLWIVTHID TVPPGDLSLW ETDPFVPVVK DGKVYGRGAE
DNGGSMIASI YAGKVLIDLG IVPEYNFGLA LVADEEAGSR YGIQYLIEKG LFRSEDMFLV
PDAGNEKGNF IEIAEKSILW FKVTVNGKQG HASRPRTTEN ALRKGAQLIT EIDETLHRKY
PDRDELFDEP LSTFEPTRTE KTVDNVNTVP GRFVFYFDCR VLPRYDLDEI LSTVESILDG
RGAELEVVVK QPAPEPTPPD SELVAKLSSA LGSLRGLEAK VGGIGGGTCA AFFRKKGWPA
VVWSTIDGTA HQPNEYRRIS HMVEDAKVFA LLGIER
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