Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tpet_1124 |
Symbol | |
ID | 5170204 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermotoga petrophila RKU-1 |
Kingdom | Bacteria |
Replicon accession | NC_009486 |
Strand | - |
Start bp | 1149014 |
End bp | 1150348 |
Gene Length | 1335 bp |
Protein Length | 444 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 640563643 |
Product | xylose isomerase |
Protein accession | YP_001244714 |
Protein GI | 148270254 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2115] Xylose isomerase |
TIGRFAM ID | [TIGR02630] xylose isomerase |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.0000286004 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATGGAAT TTTTCCCAGA AATCCCAAAG ATTCAGTTTG AAGGCAAGGA AAGCACGAAT CCGCTGGCGT TCAAGTTCTA CGATCCGAAC GAGGTGATCG ATGGAAAGCC TCTCAAGGAT CACCTGAAGT TTTCCGTCGC CTTCTGGCAC ACCTTCGTGA ACGAGGGAAG AGATCCGTTT GGAGATCCAA CCGCTGAACG CCCATGGAAC AGGTTCTCCG ATCCCATGGA CAAAGCTTTT GCGAGGGTGG ACGCTCTCTT CGAGTTCTGC GAAAAGCTCA ACATCGAGTA CTTCTGTTTC CACGACAGAG ACATCGCTCC CGAAGGAAAA ACGCTCAGAG AGACAAACAA GATACTGGAC AAAGTGGTGG AAAGAATAAA GGAAAGAATG AAGGACAGCA ACGTGAAACT CCTCTGGGGA ACGGCGAATC TGTTCTCCCA TCCGAGGTAC ATGCACGGCG CCGCGACGAC CTGCAGTGCG GATGTCTTTG CCTACGCGGC AGCCCAGGTG AAGAAAGCCC TCGAGATCAC AAAAGAACTA GGAGGAGAAG GCTACGTCTT CTGGGGTGGA AGAGAAGGCT ATGAAACTCT TCTCAACACA GATCTCGGGC TGGAACTCGA AAATCTCGCG AGATTTCTCA GAATGGCAGT AGAGTACGCA AAGAAGATCG GCTTCACCGG ACAGTTCCTC ATAGAACCCA AGCCGAAAGA ACCCACCAAG CACCAGTACG ATTTCGATGT GGCAACGGCC TACGCTTTCC TGAAGAACCA CGGCCTTGAT GAGTACTTCA AGTTCAACAT CGAAGCGAAC CACGCGACGC TTGCCGGCCA CACCTTCCAG CACGAACTGA GGATGGCAAG GATCCTCGGA AAACTCGGAA GCATCGACGC CAACCAGGGA GATCTCCTGC TCGGCTGGGA CACCGACCAG TTCCCAACGA ACATCTACGA CACAACACTT GCCATGTACG AAGTGATAAA AGCAGGAGGA TTCACAAAAG GTGGCCTCAA CTTCGACGCG AAGGTGAGGA GGGCTTCCTA CAAGGTGGAG GATCTCTTCA TCGGTCACAT CGTGGGAATG GACACCTTCG CTCTCGGCTT CAAGATAGCG TACAAGCTCG TAAAGGATGA AGTACTCGAC AGATTCATCG AAGAAAAGTA CAGGAGCTTC AAAGAAGGTA TCGGAAAAGA GATAGTAGAA GGAAAAGCCG ACTTCGAAAA ACTCGAAGAG TATATAATAG ACAAAGAGGA TATCGAGCTT CCATCCGGAA AGCAGGAGTA CCTCGAAAGC CTGCTCAACA GTTACATAGT GAAGACAATA GCGGAACTGA GGTGA
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Protein sequence | MMEFFPEIPK IQFEGKESTN PLAFKFYDPN EVIDGKPLKD HLKFSVAFWH TFVNEGRDPF GDPTAERPWN RFSDPMDKAF ARVDALFEFC EKLNIEYFCF HDRDIAPEGK TLRETNKILD KVVERIKERM KDSNVKLLWG TANLFSHPRY MHGAATTCSA DVFAYAAAQV KKALEITKEL GGEGYVFWGG REGYETLLNT DLGLELENLA RFLRMAVEYA KKIGFTGQFL IEPKPKEPTK HQYDFDVATA YAFLKNHGLD EYFKFNIEAN HATLAGHTFQ HELRMARILG KLGSIDANQG DLLLGWDTDQ FPTNIYDTTL AMYEVIKAGG FTKGGLNFDA KVRRASYKVE DLFIGHIVGM DTFALGFKIA YKLVKDEVLD RFIEEKYRSF KEGIGKEIVE GKADFEKLEE YIIDKEDIEL PSGKQEYLES LLNSYIVKTI AELR
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