| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpet_1115 |
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| Symbol | |
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| ID | 5170174 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermotoga petrophila RKU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009486 |
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| Strand | - |
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| Start bp | 1142638 |
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| End bp | 1143846 |
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| Gene Length | 1209 bp |
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| Protein Length | 402 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640563632 |
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| Product | IS605 family transposase OrfB |
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| Protein accession | YP_001244705 |
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| Protein GI | 148270245 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0675] Transposase and inactivated derivatives |
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| TIGRFAM ID | [TIGR01766] transposase, IS605 OrfB family, central region |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCCGGAC GTGTGATACG AACCTACAAA CTCGCCGTAC CAGGACATTT GAATCGAATG
TGCGAAGAAC TCAACCGCAC AGCAGCAAGA ATCTACAACA AAACGATGTC TCTTGTGCGA
AAGATACACC AAAAGAAAGG CTTCTGGCTG TCCTGGCCTG CCGCAGACAA ATACATCCTC
CGCTGGGCAG AAAACATCAA AATCCACGTC CATTCAAAGC AGGCATTTGT TCAGCTCTAC
TTTCAAGCCC TCAAAGGGTA CTTCAAAGCA GCCAAAAAGA ATCAAGATGC AAAACCTCCC
CACAAGAAAA AACGCTATCT GCCGTTCATA TGGAAAGAAA GCGCTGTAAA ACTTCTGCCA
GACGGTACCC TGAGATTGTC TTTGGGCAAA GAACGAGAAC CATTTGTTGT ACAAACACCT
CTCAAACCTC CCCTTCGCAT CAAACAGGCA AGACTTGTCT TTGAAGATGG ATACTATCTC
CACCTTGCGA TAGAGGTGGA GATTGAAGAG AAGAATGCTG GCTCTGGTGT TATGGCGGCC
GACCTTGGAG TGCTCCGTCC CATCACGTGC TTTGATGGAA AAGAAGTCAT CAGCTACCAC
GGAGGAGTCC TCAGCAGCAC TCTTCGCTAT CGAAACAAAC GCCTTGCAAG TTTTCAGTCT
GCCATAGCAG AGTGCAAGAA GGGATCAAGA AGGTACAACA AGCTTGTTAG TGCAAAGAAA
AGAGCCCTGA GACGGCTCAG AAACCAGATC AACGACATCA TGCACAAGAT CACAAGCAGT
TTCATCGGGC TGTGCCTCAG AAAACAAATC AGAACCATCG TGATAGGAGA CGTCACAGGG
ATCAGAGAAA GAGCAGACTA CAGCGACAAC GCGAACCAGA AGATCCACCA GTGGCAGTTC
AGAAAACTCA TCGAGATGAT AAGGTACAAA GCAGAGCAGT TCGGAATCGA AGTGAAACTC
ATCTCAGAAG CGAATACAAG CAAGACGTGT CCTAACTGTG GTGCAAAGAA CAATCCGAAC
GGAAGAAGAT ACCACTGCAA AGCCTGTGGT TTTGAGTATC ACAGGGACGG AGTTGGAGCA
ATCAACATCT GGAAAAGGTA TCCTGGCACA GGCCAGGTAG TAGCGGGCTT GGCCCCCGTC
AGAGGTGTGA GGTTTCATCC ACACCTCTGT GGCCATGGAG CATCTTTGGC TCCATGGAAG
GTGGCCTGA
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| Protein sequence | MPGRVIRTYK LAVPGHLNRM CEELNRTAAR IYNKTMSLVR KIHQKKGFWL SWPAADKYIL
RWAENIKIHV HSKQAFVQLY FQALKGYFKA AKKNQDAKPP HKKKRYLPFI WKESAVKLLP
DGTLRLSLGK EREPFVVQTP LKPPLRIKQA RLVFEDGYYL HLAIEVEIEE KNAGSGVMAA
DLGVLRPITC FDGKEVISYH GGVLSSTLRY RNKRLASFQS AIAECKKGSR RYNKLVSAKK
RALRRLRNQI NDIMHKITSS FIGLCLRKQI RTIVIGDVTG IRERADYSDN ANQKIHQWQF
RKLIEMIRYK AEQFGIEVKL ISEANTSKTC PNCGAKNNPN GRRYHCKACG FEYHRDGVGA
INIWKRYPGT GQVVAGLAPV RGVRFHPHLC GHGASLAPWK VA
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