Gene Tpet_1111 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpet_1111 
Symbol 
ID5169951 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermotoga petrophila RKU-1 
KingdomBacteria 
Replicon accessionNC_009486 
Strand- 
Start bp1139343 
End bp1140509 
Gene Length1167 bp 
Protein Length388 aa 
Translation table11 
GC content46% 
IMG OID640563628 
Productbifunctional 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II protein 
Protein accessionYP_001244701 
Protein GI148270241 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0108] 3,4-dihydroxy-2-butanone 4-phosphate synthase
[COG0807] GTP cyclohydrolase II 
TIGRFAM ID[TIGR00505] GTP cyclohydrolase II
[TIGR00506] 3,4-dihydroxy-2-butanone 4-phosphate synthase 


Plasmid Coverage information

Num covering plasmid clones42 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGAAGAAC TGAGAGAGAC TTTTGAGGGA GGAAAACCTG TCGTTTTGAT CGACAGAAAC 
AGAGAGAACG AAGCGGATTT TGTTTTTCCC GCTCAATTGA TCACCGAAGA CGTTGTGAAT 
TTTTTCGTCA CATACGGGAA GGGACTCTTC TGTGTTACAG CCGACGAAGA AGATCTTTTG 
AAAAGAGGGT TCGTAAAACT TTCCTCGAAC TACGGAGCGA ACTATTTTGT CCCGGTGGAC 
TGGGGCACTG GCACCGGGAT TTCGGCGTCA GAAAGGGCAG AAACGTGCAG AAAACTGGCA 
GAGGGCAGAT ATTTCTATGA GTTCAGGTAC CCAGGCCACG TCACAGTGAT CGGAGGAATC 
GGTTTCCAGA GACGAAAAGG ACACACGGAG GCATCTTTGG AAATTTCTGA ACTCGCAGGT 
TTCAGTCGTT ATGCGGTGAT CGTGGAAATT CTGGATGAGA AGGGAAATTC TCACAATCTG 
GATTATGTTT TACAAATTTC GAAGAGGTTT TCCCTCCCCG TTCTGGAGAT GGACGATGTC 
TGGCGTGAAT TTGTGAAGAG AAAGCTTCTC ATGAAGAAAA AAGCAGAAGC AACACTTCCA 
ACGGATTTCG GTGTCTTCAA GGTTGTTTCT TTCGAAAACC ACCTCGATGG CAAAGAACAC 
TTCGCAATCG TTAAGGAACC CCTCGAAGAT CCCGTTGCTG TGAGAATACA CTCCGAATGC 
GTGACCGGGG ATGTTCTCTC TTCTTTGAGG TGTGACTGCG GTTCACAGCT GGCGAATTTT 
CTCAGATACA TGTCAGCTCA CGGAGGTATC CTGATCTATT TGAGACAGGA AGGGAGAGGA 
ATCGGCCTTT CGAACAAAAT TGCAGCCTAT TCTCTTCAGG ACAAAGGTTT GGACACGGTG 
GAGGCAAACA GAGTTCTTGG TTTTTCTGAG GACGAAAGAG ATTACGCACC GGCGGTGCAG 
ATCTTGAAAG CCCTTGGCAT CGAAAGGGTT CTTCTCTTCA CCAACAACCA AAGAAAGACG 
GTTGGTCTTG AAAAATACGG AATCGAAGTT ATCGAAACAA AAAGATTGTA CGGGAGAGTA 
ACACCATACA ACAGGTTTTA TCTTTCAACA AAAATGAGAA AACTCGGACA CAAACTTGAG 
GAGATCCTTG GGGAGGTGAA TTCATGA
 
Protein sequence
MEELRETFEG GKPVVLIDRN RENEADFVFP AQLITEDVVN FFVTYGKGLF CVTADEEDLL 
KRGFVKLSSN YGANYFVPVD WGTGTGISAS ERAETCRKLA EGRYFYEFRY PGHVTVIGGI 
GFQRRKGHTE ASLEISELAG FSRYAVIVEI LDEKGNSHNL DYVLQISKRF SLPVLEMDDV 
WREFVKRKLL MKKKAEATLP TDFGVFKVVS FENHLDGKEH FAIVKEPLED PVAVRIHSEC 
VTGDVLSSLR CDCGSQLANF LRYMSAHGGI LIYLRQEGRG IGLSNKIAAY SLQDKGLDTV 
EANRVLGFSE DERDYAPAVQ ILKALGIERV LLFTNNQRKT VGLEKYGIEV IETKRLYGRV 
TPYNRFYLST KMRKLGHKLE EILGEVNS