Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tpet_1108 |
Symbol | |
ID | 5169937 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermotoga petrophila RKU-1 |
Kingdom | Bacteria |
Replicon accession | NC_009486 |
Strand | + |
Start bp | 1137201 |
End bp | 1138052 |
Gene Length | 852 bp |
Protein Length | 283 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 640563625 |
Product | HflC protein |
Protein accession | YP_001244698 |
Protein GI | 148270238 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0330] Membrane protease subunits, stomatin/prohibitin homologs |
TIGRFAM ID | [TIGR01932] HflC protein |
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Plasmid Coverage information |
Num covering plasmid clones | 45 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAATCT GGATGATTTC TCTTCTGATC ATTCTGATCG TGGTGGGTGC GATCCTTCTT TTCTCTTCTT TCTACGTCCT GGATCAGACA CAGCAAGCGG TGGTTCTGAG GTTCGGAAAG ATCGTCGCGG TGGAAACAGA ACCTGGGCTT CACTTCAAGC AGCCGTTCGT TGATAATGTG GTGAGATTCG ATAAAAGAAT CCTCCTCTAC GATATAGAAC CAGAAAAGAT CATAGCCGCC GACAAGAAAA CGCTCGTGAT AGACACGTAC GTTCTCTGGA GGATAAAAGA TGCGGAAGCG TTCATAAAAT CACTGAAGAG CGTGAAGCTC GCTCTTCCAA GAATCGACGA TGTGGTTTAC TCACACGTGA GGAACATCTT CGCAAAAGCG AACTTCGACG AGATCATCTC CGAGAAGAGA GAAGACCTTT TGAGGGAAGT CACGGCTCTT TCAAGAGAAG ATCTGAAGGA CTTCGGCATA GAAGTGGTCG ATGTGAGGGT GAAGCACGCC GACCTCCCCG CTGAGAACGA AAAGGCCGTG TACGAAAGAA TGAAAGCGGA AAGATACAGC ATCGCTGCAC AGATCAGGGC TGAAGGTGAG AAAGAGGCAA GAAAGATACG TGCGGAAGCC GACAAAACAG CGAAGGTTCT GATCGCGGAA GCTCAAAGCA AAGCAGAGCA AATCAAGGGA ACCGGAGAAG CAAGCGCGGT GAAGATCTAC GCGGAGGTGT TTTCAAAAGA CAAGGACTTC TACGAATTCT GGAGAACGAT GGAGGTTTAC AGATCCATCG AGAAAGGAAT TCTCATAATT GGAGACGAAC TCGATGCACT GAAATACCTC AAAACGAAGT AA
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Protein sequence | MKIWMISLLI ILIVVGAILL FSSFYVLDQT QQAVVLRFGK IVAVETEPGL HFKQPFVDNV VRFDKRILLY DIEPEKIIAA DKKTLVIDTY VLWRIKDAEA FIKSLKSVKL ALPRIDDVVY SHVRNIFAKA NFDEIISEKR EDLLREVTAL SREDLKDFGI EVVDVRVKHA DLPAENEKAV YERMKAERYS IAAQIRAEGE KEARKIRAEA DKTAKVLIAE AQSKAEQIKG TGEASAVKIY AEVFSKDKDF YEFWRTMEVY RSIEKGILII GDELDALKYL KTK
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