Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tpet_1100 |
Symbol | |
ID | 5170022 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermotoga petrophila RKU-1 |
Kingdom | Bacteria |
Replicon accession | NC_009486 |
Strand | + |
Start bp | 1129533 |
End bp | 1129952 |
Gene Length | 420 bp |
Protein Length | 139 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 640563617 |
Product | 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein |
Protein accession | YP_001244690 |
Protein GI | 148270230 |
COG category | [C] Energy production and conversion |
COG ID | [COG1146] Ferredoxin |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.000269447 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCAGAGG CAAAGAACGC TCCGTTGATT GGAAAGGATG CCCTTGGTCG AGAAGTTCGT GATCTTTCTA AAGTCCCATG GTGGGGCGTG GACAGGAAAG AAATAGAGTG GTACCCAACC ATCGATTACG ATAAATGTGT GACATGTGGA ATCTGCTTTG TAACCTGCGG AAGACGAGTG TTCGACTTCG ACAAAAAAGA GGGAAAAGTG ATAGTGGCGC GTCCTTACAA CTGTATGGTC GCGTGTCAGA CGTGCATGAA CCTTTGTCCA ACAGGAGCGA TAAGTTTCCC CGATGCTTCC TATATAAAAA AGCTGGTTGC GCAGAACAAA ATTGTGAAGA AAGCCTTTGA GATAATAAAG CCTCTCCTGG CCGAAGATCA TCTGTCACCA AAGGAAACGG AAACCAAACC CGAACCCTGA
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Protein sequence | MAEAKNAPLI GKDALGREVR DLSKVPWWGV DRKEIEWYPT IDYDKCVTCG ICFVTCGRRV FDFDKKEGKV IVARPYNCMV ACQTCMNLCP TGAISFPDAS YIKKLVAQNK IVKKAFEIIK PLLAEDHLSP KETETKPEP
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