| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpet_1081 |
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| Symbol | |
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| ID | 5171474 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermotoga petrophila RKU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009486 |
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| Strand | - |
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| Start bp | 1110223 |
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| End bp | 1110504 |
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| Gene Length | 282 bp |
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| Protein Length | 93 aa |
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| Translation table | 11 |
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| GC content | 35% |
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| IMG OID | 640563598 |
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| Product | CRISPR-associated Cas2 family protein |
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| Protein accession | YP_001244671 |
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| Protein GI | 148270211 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1343] Uncharacterized protein predicted to be involved in DNA repair |
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| TIGRFAM ID | [TIGR01573] CRISPR-associated endoribonuclease Cas2 |
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Plasmid Coverage information |
| Num covering plasmid clones | 38 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | GTGAGAGTTA TTCTGGTTTA CGACATTTCT ACTGAGACAA AAGAAGGAGT GAAACGATTA
AACAGAGTAA GGAAGATAGC AAGGAGATAT CTTGACCATG TTCAAAAATC GGTTTTTGAA
GGAGAACTAA CGGAGGGAGA AATCGAGAAA CTAAAATTTG AACTACAATG CATCATTGAT
AATGACGAAG ACTTTGTGAT AATTTACAAA ATGCCACCTT CTATTATGAT AGAAAGAGAC
ATTCTAACCA ATACGAACGA TCCAACATCG AATTTCATTT AG
|
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| Protein sequence | MRVILVYDIS TETKEGVKRL NRVRKIARRY LDHVQKSVFE GELTEGEIEK LKFELQCIID
NDEDFVIIYK MPPSIMIERD ILTNTNDPTS NFI
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