| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpet_1078 |
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| Symbol | |
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| ID | 5170257 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermotoga petrophila RKU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009486 |
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| Strand | - |
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| Start bp | 1104538 |
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| End bp | 1105389 |
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| Gene Length | 852 bp |
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| Protein Length | 283 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 640563597 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_001244670 |
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| Protein GI | 148270210 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.239628 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAATAACG GTCATTTTGA ATTTTTGAAA AAAGTGTTTT ATTCTTTACA ACCTGTAATT
GGTTTTGTTC TTCTGGAAAG CGACAGTGAG AATGGAAAGC TCTCTGTGAG AGTTTCCGAG
GGGAAAGTCC CTCCCTTTTT CAAAGAGGGG TTTTTCTTTA CTTCAGAGGA ACTGACTCAT
CTTATCAATG TATGTAGTAG CACATCTGCA ATTATCTCAG TATTGAAAGA CAGTAAGTAT
AGAAGGTCTT TGATCCTATA TCTAAAAAGG CCTTTGAGCA AAGATGCTCT TCTTTTGATT
CAGACTCTGC TGACGACCTT TGAAAGGGAA GATCTTTCGT TTGGTATAAA AGAACTGGAA
TACATGGCCT ATCACGATCC ACTGACAGGA CTTCCAAACA GACGCTATCT CTTCGAGTTG
GGAAACAAAT ATCTGGACTT GGCAAAGCGT GAAGGAAAGA AGGCATTCGT TCTTTTCTTG
GATCTTGCTG GATTTAAGGC AATAAATGAT ACATACGGTC ACCTGACAGG TGATGAGGTG
TTAAAGACAG TTTCGAGAAG GATTTTGGAC AGGGTAAGAA GGAGCGATGT GGTGGCTCGA
TACGGTGGCG ATGAGTTTAC CATTCTCCTC TACGATATGA AAGAAGAGTA TCTGAAATTC
TTCCTGGAAA GGATTCTTTC CACCTTCAGA GAACCCATCA GAGTGGGGAA CACAACTTTA
ACTGTTGCAT CGAACATAGG AGTTGCCAGA TTTCCTGAAG ACGGAGAAAA TCTTGAAGAA
CTTCTGAAAG TAGCAGATAT GCGAATGTAT AGAGCAAAGG AAATGAGAAC ACCTTATTTG
CTTCGTTCAT GA
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| Protein sequence | MNNGHFEFLK KVFYSLQPVI GFVLLESDSE NGKLSVRVSE GKVPPFFKEG FFFTSEELTH
LINVCSSTSA IISVLKDSKY RRSLILYLKR PLSKDALLLI QTLLTTFERE DLSFGIKELE
YMAYHDPLTG LPNRRYLFEL GNKYLDLAKR EGKKAFVLFL DLAGFKAIND TYGHLTGDEV
LKTVSRRILD RVRRSDVVAR YGGDEFTILL YDMKEEYLKF FLERILSTFR EPIRVGNTTL
TVASNIGVAR FPEDGENLEE LLKVADMRMY RAKEMRTPYL LRS
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