| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpet_1060 |
|---|
| Symbol | |
|---|
| ID | 5171596 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermotoga petrophila RKU-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009486 |
|---|
| Strand | + |
|---|
| Start bp | 1087009 |
|---|
| End bp | 1088595 |
|---|
| Gene Length | 1587 bp |
|---|
| Protein Length | 528 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 640563578 |
|---|
| Product | Dak phosphatase |
|---|
| Protein accession | YP_001244653 |
|---|
| Protein GI | 148270193 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1461] Predicted kinase related to dihydroxyacetone kinase |
|---|
| TIGRFAM ID | [TIGR03599] DAK2 domain fusion protein YloV |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 1 |
|---|
| Plasmid unclonability p-value | 0.000000112425 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGAAAAAGA TCACAGGCAG ATTCCTCAAA ATCATCATAA AGAAGGCAAC TGAAAATCTA
CTAAAACACA GAGATGAAAT AAACGCCCTG AACGTGTTTC CAGTTCCAGA CGGAGACACA
GGATCCAACA TGTGTTCCAC CATGCTGGAA GCGTGCAAGT ACATAGACAA CGTTAAAAGT
GACGATCTCA ATGAGGTATG GAAAGCCATA AAAGAAGGTG CACTGATGGG AGCCCGGGGA
AATTCCGGGG TGATACTGTC TCAGATTCTG AGAGGACTGG CAGACGCTTC CCCAAAAGAG
TTCATCGCAC CAGCAGATTT CGTAAAAATG ATCTCCAATT CCAGAAAAGT CGCTTACAGC
GCCGTCATGA GACCTGTTGA AGGAACGATG CTGACGGTCG TGAGAGTTCT GGATGAACAG
CTAAAAAACA AGAATTTTGA AACTTTCGAA GAACTCTTCG ACTGGATCGT CGAAACAGCG
AGAGACACTG TGAATCGAAC TCCACACATG CTTCAAAAAC TCAGAGAAGC CGGCGTAGTA
GATGCCGGTG CGAAGGGCCT CTATTACATA TTCGAAGGCA TGAGGGACGC CATAAAGGGA
AACATACAGG TTAATCTGGA AAAGGTGGAA CAGGCTTCCG TTGAAGAACT CCAGAGAATG
GCCTTTGAAG AGATAACGAA TCGATACTGC ACAGAAGTGG CCGTCAGGAG GAACCAGGTA
GTTGAAAAAA TTGAACTCGA AGCTTTCCTC AACGAGATTG GTGACTCTGT TGTCCTCGTC
GAACAGGATG ACCTGATAAA ACTGCACGTT CACACGAATC ATCCGGGTCA GGTACTGGAA
AAAGTCATCG AATTCGGAGA AATAGTGAAG GTAAAAATAG ACAACATGAA GCTTCAACAC
GAACACGTGA TCTCCTCACA GATCGCAAAA GAGATCGGGG TTGTCGCTGT TTCTCCTGGA
AAGGGTATCT CAGATATACT GAAGAGCCTT GGAGTGGACG TGATAGTACC CGGCGGTCAG
ACCATGAATC CCAGCTTTGC CGATCTGAAA GCGGCTGTGG AACGGACACA CGCCAGGAAT
GTCTTCCTGT TTCCAAACAA CGCAAACGTC CTTCTCACAG CAAAACAAAT AGCGGAAGCG
TTCGACGATA GAAGAGTGAT CGTCATTCCA ACCTCCTTCG TTCAGGAGTG TGTGGCAGCC
ATGGTAGAGT ACGATCCCGA CGCAGAACCT GAAGATCTTC TAAAGAGGTT TGAAGAAGCG
ATCTCTCAGT GTGTTCCAAT TTCCGTTACA AGAGCGGTGA GAGATTCCAG GTACGGAAAC
AGACGAATAA GAAAAGGAGA GTATCTGTTG TTTGTCAGAA AGGAACTAGT GTCCCACGGT
TTCAGCCTCG TGAGGGTTTT GAAAGAAGCC TTAGAAAAGG AAAACGCGCA TGAAAAAGAG
ATACTGACGA TTTTTCTTGG AGACAACCAC AGAAAACCGG AACTCGAAAA GATTCAAAAA
CTCATAGGAG AAGAATTTCC AAATCTCGAT CTTGAAATCT ACGATGGAAA ACAACCTCAC
TATCCCTATT TGATGCTTCT ACAATGA
|
|---|
| Protein sequence | MKKITGRFLK IIIKKATENL LKHRDEINAL NVFPVPDGDT GSNMCSTMLE ACKYIDNVKS
DDLNEVWKAI KEGALMGARG NSGVILSQIL RGLADASPKE FIAPADFVKM ISNSRKVAYS
AVMRPVEGTM LTVVRVLDEQ LKNKNFETFE ELFDWIVETA RDTVNRTPHM LQKLREAGVV
DAGAKGLYYI FEGMRDAIKG NIQVNLEKVE QASVEELQRM AFEEITNRYC TEVAVRRNQV
VEKIELEAFL NEIGDSVVLV EQDDLIKLHV HTNHPGQVLE KVIEFGEIVK VKIDNMKLQH
EHVISSQIAK EIGVVAVSPG KGISDILKSL GVDVIVPGGQ TMNPSFADLK AAVERTHARN
VFLFPNNANV LLTAKQIAEA FDDRRVIVIP TSFVQECVAA MVEYDPDAEP EDLLKRFEEA
ISQCVPISVT RAVRDSRYGN RRIRKGEYLL FVRKELVSHG FSLVRVLKEA LEKENAHEKE
ILTIFLGDNH RKPELEKIQK LIGEEFPNLD LEIYDGKQPH YPYLMLLQ
|
|---|
| |