Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tpet_1050 |
Symbol | |
ID | 5171373 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermotoga petrophila RKU-1 |
Kingdom | Bacteria |
Replicon accession | NC_009486 |
Strand | + |
Start bp | 1077634 |
End bp | 1079541 |
Gene Length | 1908 bp |
Protein Length | 635 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 640563568 |
Product | transketolase |
Protein accession | YP_001244643 |
Protein GI | 148270183 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0021] Transketolase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 46 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAAAGGT TTCCCTATGA AAAGCTTCCA GAAAGCGAAC TCAAAGAGTT GAAAGAACTC GGAAGGCTCT GCCGTGGCGA CATACTGAAA ATGACCTACA TAGCTGACTC AGGCCATCCT GGAGGCTCCA TGTCTTCGAT CGATCTTTAT CTTACCGTCT TCAAGTACGC AAAACTCAGA CCCGTCGATG ATCCCGCAAG AGACAGAATC GTGATCAGCC ACGGTCACAC TTCTCCGGGG GTTTACGCAG CTATGGCTCG TTTAGGATTT GTCGAGCTCG ATGAAGTCCT CACGGGATTC AGGCACCACG CTTCCGTTTT TGAAGGACAC GTGACCCGAG GTGTTGGGAT CATCGACTGG ACAACCGGAA ACCTCGGTCA GGGTCTTTCA GCCGGACTCG GTTTTGCCCT CGCATCCAGG TTCACAGGAA AAGATTACCA CGTCTTTGTT CTCATGAGTG ACGCAGAACA GGCAAAAGGA CAGGTGGCGG AGGCAAGAAG AGTGGCGAAA AAGTACGGTG TCACGAATCT CACGGTGATC ATCGACTACA ACGACGCCCA GATCAGCGGC CGTGCCAGAG ACGTCATGCC CGTGAACATA AAGGAAAACT ACTTAGCGGA CGGCTGGAGG GTCATCGAGA TCGACGGACA CGACTACGAA CAGATCTATC TCGCACTGAA AGAAGCGGTA GAAGACGAAC TGAATCCCGT TGCCATACTC GCTAAAACGG TCATGGGAAA AGGCGTATCC TTCATGGAAA ACGAGGTTAA ATACCATGGA AAGCCCCTGA ACAGAGAAGA ACTCGAAAAG GCCCTCGCTG AACTCGGCAT CGAAAACGAT GTGGATGTGT ACATCGAAAA AAGAAAACAA CTTCCAATGG AAAAGCACAA GAAAGTTTAC AAGACTTACC CGATCAAGAT CGACACGGGA GAGCCCATCA CCTACACCTC ACCGACCGAC AACAGAGGTG CGTTCGGAAA AGCCCTTCTG GATCTGGTGA AGAAGAACGC GAACAATCCA GAAGCCACTC CCATCGTCGC TGTGGACTGC GACCTGAAGG GATCGGTCAA ACTCGATCTG CTCGACAAAG AGTTCCCTGA GAGACTCTTG GAAGTGGGTG TTCAAGAACA CAACGCCGCC GCTATGGCTG GGGCACTCTC CGCAGAGGGT GTTATCACGT TCTTCGCTGA TTTTGGTGTT TTTGGAATTT CTGAAACCTA CAACCAGCAC AGGTTGAACG CCATCAATGG AACGAACCTC AAAGTCGTTG TCACACACTG TGGACTCAAC GTGGGAGAGG ACGGAAAGAC TCACCACGGA ATCGACTACG TTTCCGGGCC GATGAACTGG TACGGTTTCA AAGTGATCGT CCCCGGTGAT CCCAACCAAA CAGACAGAGC TGTGAGGTAC GCCGCGAAGG AGTACGGAAA CTTTGTGATC GCCATGGGAA GGTCGAAGCT TCCCATCATC CTCGATGAAA ACGGGAAACC TTTCTTCGGA GAGGGTTACA CCTTCGAATA CGGAAAGATC GATGTCGTTA GAAACGGAGA CGACGCGGTG ATAATAACTT ACGGTTCCAC ACTCTGTGAA GCCGTAAGCG CTGCAGACGA ACTCAAGAAA GAAGGAGTAA ACGTAGCAGT TCTGAACGTC TCCTGTCCGG TGGATCTCGA TATAGAGACC TTGAAGATGG TCGATGGAAA ACCCGTTCTC GTTGTGGAAG ATCACAACGT TTTCACCGGG CTTGGAAGTT ACCTCGGAAC CACCCTTCTT GAAAACGGCA TCATCCCGAA GAAGTACGTG AGAGTAGGTG TTCCAGAGTT CGCTGTGTCC GGCAGTTACG AAATGCTCTA CAAATTATAT GGTCTGGATA AGGAAGGAAT AATTTCCAGA CTCAGAGAAA TGCTCTGA
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Protein sequence | MERFPYEKLP ESELKELKEL GRLCRGDILK MTYIADSGHP GGSMSSIDLY LTVFKYAKLR PVDDPARDRI VISHGHTSPG VYAAMARLGF VELDEVLTGF RHHASVFEGH VTRGVGIIDW TTGNLGQGLS AGLGFALASR FTGKDYHVFV LMSDAEQAKG QVAEARRVAK KYGVTNLTVI IDYNDAQISG RARDVMPVNI KENYLADGWR VIEIDGHDYE QIYLALKEAV EDELNPVAIL AKTVMGKGVS FMENEVKYHG KPLNREELEK ALAELGIEND VDVYIEKRKQ LPMEKHKKVY KTYPIKIDTG EPITYTSPTD NRGAFGKALL DLVKKNANNP EATPIVAVDC DLKGSVKLDL LDKEFPERLL EVGVQEHNAA AMAGALSAEG VITFFADFGV FGISETYNQH RLNAINGTNL KVVVTHCGLN VGEDGKTHHG IDYVSGPMNW YGFKVIVPGD PNQTDRAVRY AAKEYGNFVI AMGRSKLPII LDENGKPFFG EGYTFEYGKI DVVRNGDDAV IITYGSTLCE AVSAADELKK EGVNVAVLNV SCPVDLDIET LKMVDGKPVL VVEDHNVFTG LGSYLGTTLL ENGIIPKKYV RVGVPEFAVS GSYEMLYKLY GLDKEGIISR LREML
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