| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpet_1031 |
|---|
| Symbol | |
|---|
| ID | 5170266 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermotoga petrophila RKU-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009486 |
|---|
| Strand | + |
|---|
| Start bp | 1060566 |
|---|
| End bp | 1061921 |
|---|
| Gene Length | 1356 bp |
|---|
| Protein Length | 451 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 640563549 |
|---|
| Product | replicative DNA helicase |
|---|
| Protein accession | YP_001244625 |
|---|
| Protein GI | 148270165 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0305] Replicative DNA helicase |
|---|
| TIGRFAM ID | [TIGR00665] replicative DNA helicase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 53 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGTGTTC CCCCGCACAA CTTAGAGGCC GAAGTTGCTG TGCTCGGAAG CATATTGATA
GATCCGTCGG TAATAAACGA CGTTCTTGAA ATTTTGAGCC ACGAAGATTT CTATCTGAAA
AAACACCAAC ACATCTTCAG AGCGATGGAA GAGCTTTACG ACGAAGGAAA ACCGGTGGAC
GTGGTTTCCG TCTGTGACAA GCTTCAAAGC ATGGGAAAAC TCGAGGAAGT AGGTGGAGAT
CTGGAAGTGG CCCAGCTCGC TGAGGCTGTG CCCAGTTCTG CACACGCACT TCACTACGCG
GAGATCGTCA AGGAAAAATC CATTCTGAGG AAACTCATTG AGATCTCCAG AAAAATCTCA
GAAAGTGCCT ACATGGAAGA AGATGTGGAG ATCCTGCTCG ACAACGCAGA AAAGATGATC
TTCGAGATCT CAGAGATGAA AACGACAAAA TCCTACGATC ATCTGAGAGG CATCATGCAC
CGGGTGTTTG AAAACCTGGA GAACTTCAGG GAAAGAGCCA ACCTTATAGA ACCCGGTGTG
CTCATAACGG GACTACCAAC GGGATTCAAA AGTCTGGACA AACAGACCAC AGGGTTCCAC
AGCTCCGATC TGGTGATAAT AGCAGCGAGA CCCTCCATGG GAAAAACCTC CTTCGCACTC
TCAATAGCGA GGAACATGGC TGTCAATTTC GAAATCCCCG TCGGAATATT CAGTCTCGAG
ATGTCCAAGG AACAGCTCGC TCAAAGACTA CTCAGCATGG AGTCCGGTGT GGATCTTTAC
AGCATCAGAA CAGGATACCT GGATCAGGAG AAGTGGGAAA GACTCACAAT AGCGGCTTCT
AAACTCTACA AAGCACCCAT AGTTGTGGAC GATGAGTCAC TCCTCGATCC GCGATCGTTG
AGGGCAAAAG CGAGAAGGAT GAAAAAAGAA TACGATGTAA AAGCCATTTT TGTCGACTAT
CTCCAGCTCA TGCACCTGAA AGGAAGAAAA GAAAGCAGAC AGCAGGAGAT ATCCGAGATC
TCGAGATCTC TGAAGCTCCT TGCGAGGGAA CTCGACATAG TGGTGATAGC GCTTTCACAG
CTTTCGAGGG CCGTAGAACA GAGAGAAGAC AAAAGACCGA GGCTGAGTGA CCTCAGGGAA
TCCGGTGCGA TAGAACAGGA CGCAGACACA GTCATCTTCA TCTACAGGGA GGAATATTAC
AGGAGCAAAA AATCCAAAGA GGAAAGCAAG CTTCACGAAC CTCACGAAGC TGAAATCATA
ATAGGTAAAC AGAGAAACGG TCCCGTTGGA ACGATCACTC TGATCTTCGA CCCCAGAACG
GTTACGTTCC ATGAAGTCGA TGTGGTGCAT TCATGA
|
|---|
| Protein sequence | MRVPPHNLEA EVAVLGSILI DPSVINDVLE ILSHEDFYLK KHQHIFRAME ELYDEGKPVD
VVSVCDKLQS MGKLEEVGGD LEVAQLAEAV PSSAHALHYA EIVKEKSILR KLIEISRKIS
ESAYMEEDVE ILLDNAEKMI FEISEMKTTK SYDHLRGIMH RVFENLENFR ERANLIEPGV
LITGLPTGFK SLDKQTTGFH SSDLVIIAAR PSMGKTSFAL SIARNMAVNF EIPVGIFSLE
MSKEQLAQRL LSMESGVDLY SIRTGYLDQE KWERLTIAAS KLYKAPIVVD DESLLDPRSL
RAKARRMKKE YDVKAIFVDY LQLMHLKGRK ESRQQEISEI SRSLKLLARE LDIVVIALSQ
LSRAVEQRED KRPRLSDLRE SGAIEQDADT VIFIYREEYY RSKKSKEESK LHEPHEAEII
IGKQRNGPVG TITLIFDPRT VTFHEVDVVH S
|
|---|
| |