Gene Tpet_1012 details

Gene Information

• Locus tag: Tpet_1012
• ID: 5171772
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Thermotoga petrophila RKU-1
• Kingdom: Bacteria
• Replicon accession: NC_009486
• Strand: +
• Start bp: 1040888
• End bp: 1041502
• Gene Length: 615 bp
• Protein Length: 204 aa
• Translation table: 11
• GC content: 45%
• IMG OID: 640563530
• Product: PASTA domain-containing protein
• Protein accession: YP_001244606
• Protein GI: 148270146
• COG category: [S] Function unknown
• COG ID: [COG2815] Uncharacterized protein conserved in bacteria

Plasmid Coverage information

• Num covering plasmid clones: 30
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGAGTGT TTCTTGGAAT AGTAACCGGC ATCGTGGTTG GTGGGCTTTT CTTTTTGTTC 
GCAATGAAGC TTTATCAAAG TCAGTACAGC ACGGTACCAG ATGTTATCGG GCTTATCGGG 
ATAGAAGCGT GTGAAAGACT GAGGACATCT GGGTTGTTTT GTGATGCGTC TTCTACTGAA 
ACAGTAGTGG ACACTTACCC CTGGGTTGGT TCACGAGTGA AAAAGGGAAG AACGGTAAAC 
CTTTACTATG AAAATCCCCA GAAAAGAACC GTGCCTCGTC TTTCACAGTT GAATCTCTCG 
GTCGCAGAAG AGATCCTGAA GAGACTCGGA TGGAATTACG AAACTGTTTA CTTTCCTTTT 
GGCATTGAAA AAGACAGGAT TCTTGCAACC TATCCGGAAG ATGGGCAGGT CTACAACGGA 
AAACTAATTC TTCTGATCGA TACAGGTGAA AGAGAAAGCT ATTTTCTGGT GGAAAATTTT 
GTGGGTAAAA AAGCGGATGA ACTGAAGGAC GATCCCCGTG TTTTACTGTT TGGAACGGGT 
GATACGGTGG TGGCGCAGTA TCCTCCAGAA GGCTCCATAG CAACGGAAGT TATTCTCATC 
CTTGGGGAGG AATGA 

 

Protein sequence

MRVFLGIVTG IVVGGLFFLF AMKLYQSQYS TVPDVIGLIG IEACERLRTS GLFCDASSTE 
TVVDTYPWVG SRVKKGRTVN LYYENPQKRT VPRLSQLNLS VAEEILKRLG WNYETVYFPF 
GIEKDRILAT YPEDGQVYNG KLILLIDTGE RESYFLVENF VGKKADELKD DPRVLLFGTG 
DTVVAQYPPE GSIATEVILI LGEE