| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpet_1011 |
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| Symbol | |
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| ID | 5171718 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermotoga petrophila RKU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009486 |
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| Strand | + |
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| Start bp | 1039860 |
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| End bp | 1040891 |
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| Gene Length | 1032 bp |
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| Protein Length | 343 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 640563529 |
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| Product | ribosomal RNA large subunit methyltransferase N |
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| Protein accession | YP_001244605 |
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| Protein GI | 148270145 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0820] Predicted Fe-S-cluster redox enzyme |
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| TIGRFAM ID | [TIGR00048] radical SAM enzyme, Cfr family |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGAAAAATC TACTCGATCT TTCTTACGAA GAACTGATAA CCGAGATCAC GAACCTGGGT
CTCGAACGAT ACAGGGCAGA TCAAATTCTG GACTGGATAT TCAACAAAAA AGTGAACAAC
TTCGACGAGA TGACAAACCT TTCGAAAAAG CACCGTGCTC TTTTGAAAGA GCACTTTTCT
ATTCCCTTCT TGAAACTCCT CGACAAGAAG GTTTCCAGAA TAGATGGTAC CACCAAATTC
CTCTGGGAAC TCGAAGATGG AAATACGATA GAATCTGTGA TGCTTTTCCA TCCAGACAGA
ATAACGGCCT GCATCTCAAC CCAGGTTGGA TGTCCTGTGA AGTGTATTTT CTGTGCCACA
GGAATGAGTG GATTTGTGAG GAATCTCACC ACAGGAGAAA TCGTAGCACA GATCCTTTCC
ATGGAAAAAG AAGAGAAGAA AAAAATAGGA AACGTTGTGT ACATGGGAAT GGGAGAACCT
CTTCTGAACT ACGAAAACAC GATAAAAAGC ATAAGAACAC TGAACCACAA AAAGATGGGA
AACATTGGTA TCAGGAGGAT CACGATTTCG ACAGTTGGAA TCCCTGATAG AATAATTCAG
CTGGCCGAAG AAGGGCTCGA CGTGAAACTC GCTCTTTCAC TCCATGCCCC AACAAATTTC
AAGAGAGATC AGCTCGTTCC TTTGAACAAG AAGTACTCCA TCGAAGAGAT CTTGAATGCG
GTGAAGATCT ATCAGAAAAA GACGGGAAAC CGTGTAACAA TAGAGTACGT ACTCATAAAG
GGCATGAACG ATGAGATAAG CGACGCAAAG AAGCTGGCTG AAATCCTGAA AAACATGAAG
GTCTTCGTGA ATTTGATCCC TGTGAATCCA ACGGTGGAAG ATCTGAAAAA ACCATCGCGG
GAACGACTGT TGACCTTCAA GAGGATATTA CTGGAAAGCG GAATCGAAGC AGAAATCAGA
CGAGAAAAAG GTGCCGACAT TGAGGCAGCC TGCGGTCAGT TGAGGTTGAA GAGAATAAAG
TCAACATCAT GA
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| Protein sequence | MKNLLDLSYE ELITEITNLG LERYRADQIL DWIFNKKVNN FDEMTNLSKK HRALLKEHFS
IPFLKLLDKK VSRIDGTTKF LWELEDGNTI ESVMLFHPDR ITACISTQVG CPVKCIFCAT
GMSGFVRNLT TGEIVAQILS MEKEEKKKIG NVVYMGMGEP LLNYENTIKS IRTLNHKKMG
NIGIRRITIS TVGIPDRIIQ LAEEGLDVKL ALSLHAPTNF KRDQLVPLNK KYSIEEILNA
VKIYQKKTGN RVTIEYVLIK GMNDEISDAK KLAEILKNMK VFVNLIPVNP TVEDLKKPSR
ERLLTFKRIL LESGIEAEIR REKGADIEAA CGQLRLKRIK STS
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