| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpet_1006 |
|---|
| Symbol | |
|---|
| ID | 5171719 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermotoga petrophila RKU-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009486 |
|---|
| Strand | - |
|---|
| Start bp | 1036978 |
|---|
| End bp | 1037823 |
|---|
| Gene Length | 846 bp |
|---|
| Protein Length | 281 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 640563524 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001244600 |
|---|
| Protein GI | 148270140 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1660] Predicted P-loop-containing kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.0782476 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGAAGAGAA TAGTCGTTGT ATCTGGGCTT TCGGGGGCGG GTAAAACCAC TGCAATGGGT
TTTCTTGAGG ATCTGGGGTA TTTCTGTGTT GATAACGTTC CCGGTAACAT ACTGGAGGAA
CTCTTGAAGC TCTTCATGAG TTCTGACCTC GAAAAGATGG CGATGGCTAT TGATGTGCGA
AGCGAACACC TCGGAGATCC CATATCAACG GTTGAGAGGA TAAAGGAGAA AACGAACGCT
CTGGTGATTT TTTTGGAGGC GTCCACGGAA GAACTCCTAA GAAGATACGC TCTGACGAGA
AGAAGACACC CTCTTCAAAA GGACGGATTA GGGCTGGAAG ACGCCATAGA GAAAGAGAAG
GAAATCCTCT CTCATATAAA GGAAATAGCG GATGTTGTTA TAGATACGAC CAGGATGAAC
ACGCATCAAC TGCGCGAAAC CCTGGCGCAT TTTCTCGTGA ACCAAGCCGG TGGAACCTCT
GTCAGAATAA TGAGTTTCGG ATTTAAACAC GGAATCCCGA TGGACGCGGA TTTCGTTTTT
GATGCTCGTT TTCTTCCGAA TCCACACTAC GTACCGGAAC TTTCTTCGAA AACGGGGTTG
GACAGCGAGG TAGAAGCGTA CTTCAAAAAT TATCCGGTGG TGGAAGAGTT CATCGAAAAG
ATCTTTGAAG TACTCAAGGT AGCGATAGAA GAGTATCAGA GGACTGGAAG AAGGATAATC
ACTGTAGGGA TAGGATGTAC CGGTGGCAAA CATAGATCCG TGTACATCAC ACATAGACTG
AAAGAAATGC TGGAAAGAGA AGGTTTTACG GTCATTGAGA AGCACAGAGA TATAGAGAAG
GTGTGA
|
|---|
| Protein sequence | MKRIVVVSGL SGAGKTTAMG FLEDLGYFCV DNVPGNILEE LLKLFMSSDL EKMAMAIDVR
SEHLGDPIST VERIKEKTNA LVIFLEASTE ELLRRYALTR RRHPLQKDGL GLEDAIEKEK
EILSHIKEIA DVVIDTTRMN THQLRETLAH FLVNQAGGTS VRIMSFGFKH GIPMDADFVF
DARFLPNPHY VPELSSKTGL DSEVEAYFKN YPVVEEFIEK IFEVLKVAIE EYQRTGRRII
TVGIGCTGGK HRSVYITHRL KEMLEREGFT VIEKHRDIEK V
|
|---|
| |