Gene Tpet_1002 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpet_1002 
SymbolgreA 
ID5171288 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermotoga petrophila RKU-1 
KingdomBacteria 
Replicon accessionNC_009486 
Strand
Start bp1034215 
End bp1034685 
Gene Length471 bp 
Protein Length156 aa 
Translation table11 
GC content47% 
IMG OID640563520 
Producttranscription elongation factor GreA 
Protein accessionYP_001244596 
Protein GI148270136 
COG category[K] Transcription 
COG ID[COG0782] Transcription elongation factor 
TIGRFAM ID[TIGR01462] transcription elongation factor GreA 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000000000716767 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGAAAG TCCGTCTCAC CCGTGAGGGT TATGAGAAGC TGAAGAAAGA ACTGGAAGAT 
CTGAAAAGGA AATTCATGTA CGAGATCTCT GAAAGAATAA AAGAAGCGAG AGAACTCGGA
GATCTGTCGG AAAACTCGGA GTACGAAGCT GCGAAGAACG AACAGGGACG TGTTGGAAGC
AGGATCATGG AGATCGAACA GATCCTGAGC AACGCAGAGA TCATAGAAGA TTCTGAGGAA
AGCGACGAGG TTACACTGGG GAAATGGGTT GTTATAAAGA ACCTGGATAC CGGTGAAGAA
CACAAGTTTC GAATCGTCAC ACCTCAGGAA GCGGACTTTT TCGCTCAAAA ACTGAGCTCC
GACTCTCCAC TGGGCAAAAG CCTTCTCGGT AGAAAGGTGG GAGATGTGGT AAAGGTAAAA
GCTCCCAGTG GCGTTCAGCG TTATCAGGTG ATGGCGGTAA TGAACAAGTA A
 
Protein sequence
MKKVRLTREG YEKLKKELED LKRKFMYEIS ERIKEARELG DLSENSEYEA AKNEQGRVGS 
RIMEIEQILS NAEIIEDSEE SDEVTLGKWV VIKNLDTGEE HKFRIVTPQE ADFFAQKLSS
DSPLGKSLLG RKVGDVVKVK APSGVQRYQV MAVMNK