| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpet_1000 |
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| Symbol | |
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| ID | 5171712 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermotoga petrophila RKU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009486 |
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| Strand | - |
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| Start bp | 1030951 |
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| End bp | 1032696 |
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| Gene Length | 1746 bp |
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| Protein Length | 581 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640563518 |
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| Product | hypothetical protein |
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| Protein accession | YP_001244594 |
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| Protein GI | 148270134 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.00918654 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGAAAAT GGATGAAAAA GTGGCAAGGG GTTATTATCT GGGCAGTCGC CATTGCGTTC
GTGGCGGGTA TGATCTGGTG GTCGGTGTCG ATCAACCTCA GAAACACCCA GAACAACGTT
AAATACACCC TCGAACAGAG TCTCGCTTAC ATCACAAAAG ACGGAACGGC TTTGAACGAT
TCCACCTATT GGCTCATGCC GTGGGAAGTG AACGACTATT ACTCCAACCT GTTGAGTTCT
TATCAGATCA TATCTCTAGA TCCACTTTTT GAGGAACCCA GACTCAAAGC TCTGATAGCG
GACGTCTTTC TCCAGCAGAA AGTGGTTCTT TACTATGCGG AAAAGAACGA CATAAAGCCT
TCCAAGAAAG AAATCAACCA GGAAGTGAAC AACGTTATCC AAACAATAAA GAACGATCAA
AATCAGCTCA ACCGGATAGA GAGAACGTAC GGAAGTCTTT CGAACTACGA GAAGAACTAC
CTGGAGCCTC AAATTCGAGT TCAGCTCACC ATCAAGAAGG TTCAGGAAAA AGTGGGAGTT
GTCACCGAGG ATGAAATAAA GAAATATTTC GAGGAAAACA AGGAAGACCT TCAGAAGCAG
TACGACAGAG TTGACATAGA AGCTGTGTCG TTCGACAGCA GTTCCACGGC TCAGGGGTTC
ATTGCAAAAG CAAGTGAGGT GGGTTTCGAT GAAGCAGCTT CCAGTATGAA TGTTACTGTT
CAACCTTTTT CCAACGCTAC AAGGGGGATT TTCCCGGATG AAATAGACAC GGCTCTGTTC
AGTGCCACTC CAGGTTCGAT TGTTGGACCG TTCTTTTTCC TCGATCAGTG GTACGTGTTC
AGGGTGAAGA CTTCCTCGGT TCTCACAGAT TTCAACGCCT TCGAGAACAG CGACGCGTAC
AGTGATGTGA AAACGAAGCT GGAACAGGAA AAATTCCAGA AGTGGTTGGA AGAGTTCATG
AAGGAAGAAA ATCTATCGTA CGCGTTCAAC GATCAGGTTC TTGAATACTG GTGGAAGTAC
TTCAAGAACG AAGAAGACCT CTACGGAAAA CTGGCGAACC TTCTCTTCCA GGGAGAAAAC
CTGGTAACAG AAACATCTGA TGAGCTGAAA TCTCTCTTCG TCCTTCTCTC CGACAGCAAG
ATCCAGGAAC TCACCAAACA GATAGCCGAA TTGACTCAGT ACAGAACAGC GCTTGAAAAT
TCTCAGGAAC CAGATGAGGA TCTTATAAAG AAGTACGGGA AACTTTCGAT CGAGGAAGTC
GACGCAAGAA AAGAAGAGCT TGAAAAGAAA AAAGCAGAGT TGGAAAACAA AAAAAGAGCA
GTTGTGGATT ATCTTTACGA GAACTACCCG TCTTCCACGT ATGTACTGGA ATACGCGTAC
CGCTTGCACC CCAACGACAT AAACATCAAG TACAACTATT ACGCCAATCT TTACAATCAA
ATCAAACCTT ATCTGTCAAC TGGAACCTAC GATCCGAACC AGATATTTGG GGTTCTTCTC
GGTCTCTACA CAGTGGCCAA TGCAACGGAC GCTTCTACCA GCATACGTCT CGACTCTTAT
TACATGCTCT ACGATATGAG CCTTGCACTG AACGATCCCA CGTCTGCGAA GTATTACCTT
GATGAGATGA AAAAAATCGA TCCAAATTTC ATGGATTACG AGTCTGCCTA CAATCAGGTG
GAATCAATTC TCGAAGCCAT GAAAGCATCA GAAGAATCTA CACCTTCTAC ATCGACAGGA
GAATGA
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| Protein sequence | MRKWMKKWQG VIIWAVAIAF VAGMIWWSVS INLRNTQNNV KYTLEQSLAY ITKDGTALND
STYWLMPWEV NDYYSNLLSS YQIISLDPLF EEPRLKALIA DVFLQQKVVL YYAEKNDIKP
SKKEINQEVN NVIQTIKNDQ NQLNRIERTY GSLSNYEKNY LEPQIRVQLT IKKVQEKVGV
VTEDEIKKYF EENKEDLQKQ YDRVDIEAVS FDSSSTAQGF IAKASEVGFD EAASSMNVTV
QPFSNATRGI FPDEIDTALF SATPGSIVGP FFFLDQWYVF RVKTSSVLTD FNAFENSDAY
SDVKTKLEQE KFQKWLEEFM KEENLSYAFN DQVLEYWWKY FKNEEDLYGK LANLLFQGEN
LVTETSDELK SLFVLLSDSK IQELTKQIAE LTQYRTALEN SQEPDEDLIK KYGKLSIEEV
DARKEELEKK KAELENKKRA VVDYLYENYP SSTYVLEYAY RLHPNDINIK YNYYANLYNQ
IKPYLSTGTY DPNQIFGVLL GLYTVANATD ASTSIRLDSY YMLYDMSLAL NDPTSAKYYL
DEMKKIDPNF MDYESAYNQV ESILEAMKAS EESTPSTSTG E
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