| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpet_0997 |
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| Symbol | |
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| ID | 5170797 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermotoga petrophila RKU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009486 |
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| Strand | + |
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| Start bp | 1027478 |
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| End bp | 1028791 |
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| Gene Length | 1314 bp |
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| Protein Length | 437 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640563515 |
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| Product | MATE efflux family protein |
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| Protein accession | YP_001244591 |
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| Protein GI | 148270131 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0534] Na+-driven multidrug efflux pump |
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| TIGRFAM ID | [TIGR00797] putative efflux protein, MATE family |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.207525 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAAACTCT CAATCCCCAT GATGCTTGCC ATGTTAGTTC AGACGATTTA CAACCTGGCC
GATGGTATTT GGGTTGCGGG ACTGGGGCCT TATGCGCTGG CAGCGATAGG ATTGTTCTTC
CCTGTTTTCA TGGTGATCAT CTCCCTCGCC GCAGGTATAG GGGTTGGAGC GAGTTCGGTG
GTGTCCCAAA AGATCGGAGA AAGAGACAAG GAAGGAGCAG ATACCGCGGC TTCTGTTTCC
ATCCTGCTTT CAATCGTCAT TGGTTTTTTG AGCATTGCTG TTATCCTTCC CTTTATTTCT
GACATCCTCA GTTTCGCGGG AGCTCAGGGG GAAACTCTCA GACTGGCCCT CGAGTATTCG
GTGATCCTCG TGTATTTCAT TCCCCTTATC ATGTTCAACA ACGTAGCAAA CGGTGTTTTC
AGAGGTGAGG GAGACGCGAA AAGAGCGATG GTGGCCATAA CTATAGGTTC CCTTCTGAAC
ATAGGTCTGG ATCCCGTGTT CATCTACGTC TTCGGTATGG GGGTCAGAGG AGCAGCGTAC
GCCACCGTAG TATCAATCGC TGTTTCTTCC CTTCTGATTG CGTACTGGAT GTTTTTCAAG
AAGGACACGT ACGTATCCTT CCGTTTGAAA TGGGATGGAG AAATTCTGAA GAGAATATTG
AAGATCGGTA TTCCGGCTTC CCTGGCGCAG GCCTCGATGT CGGTGGCGAT CTACGTGCTC
AACGTCTTTG CGGTGAGGGC AGGAGGAGAC TACGGAGTTG CGGTTTTCAC GAGTGCGTGG
CGTGTTATAA ATTTTGGGAC TGTCCCGCTC ATCGGAATGG CCATGGCCGT GACATCCGTT
ACAGGTGCCG CTTTTGGTGA GAGAAACGGA GAAAAACTCG AAACGGCACA TCTCTACGCC
GTGAAACTCG GATTTTTCGT AGGGCTGGCA GTGATGTTCA CAATCTTGAT TTTTGCCCCA
TACATCGCTA GGCTGTTCAC TTATTCTCAG GAAGGTGAAA AATTATACAG CGATCTGGTG
AAAGCCCTCA GAATCCTGAG TCTTTTTCTT CCAGGTGTTC CATTTGGAAT GTTCACCTCC
TCCATGTTTC AGGGAGTGGG TCAGGGACTC AAAAGTCTGA TTGTCACCAT CATGAGAACT
GTGATTATGC AGGTTGTCTT TTCGTGGCTG TTCGTCTTCG TTCTGAGAAT AGGACTTGTG
GGAGTCTGGT GGGGCATAGT CCTTGGAAAC GCCACATCGG CTTTCATCAC TTTCAACTGG
GGAAGGTTCA CAGTGAAACA CCTCAAAAGA AATTTTCAGA AAAACATCGT ATAG
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| Protein sequence | MKLSIPMMLA MLVQTIYNLA DGIWVAGLGP YALAAIGLFF PVFMVIISLA AGIGVGASSV
VSQKIGERDK EGADTAASVS ILLSIVIGFL SIAVILPFIS DILSFAGAQG ETLRLALEYS
VILVYFIPLI MFNNVANGVF RGEGDAKRAM VAITIGSLLN IGLDPVFIYV FGMGVRGAAY
ATVVSIAVSS LLIAYWMFFK KDTYVSFRLK WDGEILKRIL KIGIPASLAQ ASMSVAIYVL
NVFAVRAGGD YGVAVFTSAW RVINFGTVPL IGMAMAVTSV TGAAFGERNG EKLETAHLYA
VKLGFFVGLA VMFTILIFAP YIARLFTYSQ EGEKLYSDLV KALRILSLFL PGVPFGMFTS
SMFQGVGQGL KSLIVTIMRT VIMQVVFSWL FVFVLRIGLV GVWWGIVLGN ATSAFITFNW
GRFTVKHLKR NFQKNIV
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