| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpet_0996 |
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| Symbol | |
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| ID | 5171790 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermotoga petrophila RKU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009486 |
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| Strand | - |
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| Start bp | 1026748 |
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| End bp | 1027350 |
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| Gene Length | 603 bp |
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| Protein Length | 200 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 640563514 |
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| Product | HAD family hydrolase |
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| Protein accession | YP_001244590 |
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| Protein GI | 148270130 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1011] Predicted hydrolase (HAD superfamily) |
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| TIGRFAM ID | [TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.196077 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | GTGAGAATTT TCCTTTTCGA TTACGACGGC ACACTGGCCG AAGACAACGG GTTCGCAGAG
AAATATTTTA AGAAACTCAC TTCTTTTTTC AGAGATAGAG GTGTTTCGAT CTCTCCAGAG
CTGGTTCTTG GCTGTGTGGA GGAAATAACC AGGAATCCCG ATGGATCAAC CAATCTGGAG
AGATACATGA AATGCCTTGG AAAGAGAACG TCACAGTGTG CAGAGAAATG GAAAGAACTC
TTCATGGAGT TTTATGAAAG CGAACTTTTC GATTCGCTCA AAGATACGGT TAAACCTGTG
AGGAAGATAG TGGATCTTCT GAAAGAGAAG GAAAAAGAAG GGAAGGTTGT TCTGGCAACG
AACCCTGTCT TTCCAAGAAT CGCTATTTTG AAGCGACTGA ACTGGATTGG ATTGTCAGAA
GACGATTTTC ACTTGATAAC GGACATGGAG AGCTTCCATT TTTGCAAGCC AGATCCGAGG
TACTACCTCG AGATATGTGA AAAGATGAGA GTTTCTCCGG AAGACTGTGT TATGTACGGG
GACGACGAAT TGAACGATGG AGTGTGTGAA AAGTTGGGGA TGAAGTTCAT CAGAGTCCGC
TGA
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| Protein sequence | MRIFLFDYDG TLAEDNGFAE KYFKKLTSFF RDRGVSISPE LVLGCVEEIT RNPDGSTNLE
RYMKCLGKRT SQCAEKWKEL FMEFYESELF DSLKDTVKPV RKIVDLLKEK EKEGKVVLAT
NPVFPRIAIL KRLNWIGLSE DDFHLITDME SFHFCKPDPR YYLEICEKMR VSPEDCVMYG
DDELNDGVCE KLGMKFIRVR
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