Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tpet_0994 |
Symbol | |
ID | 5171755 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermotoga petrophila RKU-1 |
Kingdom | Bacteria |
Replicon accession | NC_009486 |
Strand | + |
Start bp | 1023893 |
End bp | 1025080 |
Gene Length | 1188 bp |
Protein Length | 395 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 640563512 |
Product | aspartate aminotransferase |
Protein accession | YP_001244588 |
Protein GI | 148270128 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0436] Aspartate/tyrosine/aromatic aminotransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.00992397 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGTTCTCCG ATCGCGTCCT GCTGACCGAG GAAAGCCCAA TCAGAAAACT GGTTCCCTTC GCTGAAATGG CAAAGAAGCG AGGAGTAAGG ATACACCACC TGAACATAGG ACAGCCCGAT CTGAAAACTC CCGAGGTGTT TTTTGAGCGC ATCTACGAAA ACAAGCCGGA AGTGGTGTAC TACTCTCACT CTGCGGGTAT CTGGGAATTG AGAGAGGCTT TCGCATCTTA CTACAAAAGA AGACAGAGGG TAGATGTGAA ACCGGAAAAC GTTCTGGTGA CGAACGGTGG AAGCGAAGCC ATTCTTTTTT CATTCGCTGT GATAGCAAAT CCTGGTGACG AGATCCTCGT TCTGGAACCG TTCTACGCGA ATTACAACGC TTTCGCGAAG ATCGCCGGTG TGAAATTGAT TCCCGTAACG AGGAGAATGG AAGAAGGATT CGCCATCCCT CAGAACCTCG AAAGTTTCAT AAACGAAAGA ACGAGGGGAA TAGTACTTTC AAATCCCTGC AATCCGACCG GGGTGGTTTA TGGAAAAGAC GAGATGAGAT ATCTCGTGGA AATAGCGGAA AGACACGGAC TCTTTCTGAT CGTCGACGAG GTGTACAGCG AAATCGTGTT TCGGGGAGAA TTCGCAAGTG CCCTCAGCAT TGAAAGTGAC AAAGTCGTAG TGATAGACAG TGTATCGAAG AAGTTCAGCG CCTGTGGGGC GAGGGTAGGA TGTCTGATCA CGAGAAACGA AGAATTGATA TCACACGCCA TGAAACTGGC TCAGGGGAGG CTCGCTCCAC CTCTGTTAGA ACAAATCGGA TCCGTTGGTT TGCTGAATCT CGACGATTCC TTTTTTGATT TCGTGAGGGA AACGTACAGA GAGAGAGTCG AAACAGTATT GAAGAAACTC GAAGAACACG GTTTGAAACG TTTCACAAAA CCCTCAGGTG CCTTCTACAT AACCGCGGAA CTCCCCGTGG AGGACGCGGA AGAATTCGCA AGGTGGATGC TGACAGATTT CAACATGGAT GGTGAAACAA CCATGGTCGC TCCCCTGAGG GGATTCTATT TGACTCCAGG GCTTGGAAAA AAAGAGATAA GAATCGCGTG CGTGCTTGAG AAGGATCTCC TTTCCAGGGC CATTGACGTG TTGATGGAAG GTTTGAAGAT GTTTTGCTCG AGCCGCATCT CCTGTTGA
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Protein sequence | MFSDRVLLTE ESPIRKLVPF AEMAKKRGVR IHHLNIGQPD LKTPEVFFER IYENKPEVVY YSHSAGIWEL REAFASYYKR RQRVDVKPEN VLVTNGGSEA ILFSFAVIAN PGDEILVLEP FYANYNAFAK IAGVKLIPVT RRMEEGFAIP QNLESFINER TRGIVLSNPC NPTGVVYGKD EMRYLVEIAE RHGLFLIVDE VYSEIVFRGE FASALSIESD KVVVIDSVSK KFSACGARVG CLITRNEELI SHAMKLAQGR LAPPLLEQIG SVGLLNLDDS FFDFVRETYR ERVETVLKKL EEHGLKRFTK PSGAFYITAE LPVEDAEEFA RWMLTDFNMD GETTMVAPLR GFYLTPGLGK KEIRIACVLE KDLLSRAIDV LMEGLKMFCS SRISC
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