Gene Tpet_0988 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpet_0988 
Symbol 
ID5171347 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermotoga petrophila RKU-1 
KingdomBacteria 
Replicon accessionNC_009486 
Strand
Start bp1017775 
End bp1018929 
Gene Length1155 bp 
Protein Length384 aa 
Translation table11 
GC content47% 
IMG OID640563506 
Productcysteine desulfurase 
Protein accessionYP_001244582 
Protein GI148270122 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1104] Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00170746 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGGGTTT ATTTTGACAA CAACGCAACG ACGAGGGTGG ACGATCGGGT TCTCGAAGAG 
ATGATTGTTT TCTACCGCGA AAAGTATGGA AATCCCAATT CTGCTCACGG CATGGGTATA
GAGGCGAATT TACACATGGA AAAAGCGAGA GAAAAGGTGG CAAAGGTACT CGGTGTCTCA
CCTTCAGAAA TATTCTTCAC CTCCTGTGCA ACGGAGTCGA TAAACTGGAT TCTCAAAACG
GTCGCTGAGA CGTTCGAAAA AAGAAAAAGA ACCATCATCA CAACTCTCAT AGAGCACAAA
GCCGTTCTCG AAACGATGAA ATATCTATCG ATGAAAGGTT TCAAAGTGAA GTACGTTCCC
GTTGATTCCA GAGGTGTTGT GAAACTGGAA GAACTGGAAA AACTTGTAGA TGAGGACACG
TTCCTTGTCA GCATCATGGC TGCGAACAAC GAGGTGGGAA CTATCCAGCC CGTTGAAGAT
GTGACTAGGA TAGTGAAGAA AAAGAACAAA GAGGCCCTCG TTCATGTCGA TGCCGTTCAG
ACGATAGGGA AAATTCCATT TTCCCTCGAG AAACTGGAAG TGGACTACGC GAGTTTCAGC
GCGCACAAAT TTCACGGACC GAAAGGCGTT GGAATAACCT ACATCAGGAA GGGAGTTCCT
ATCAGACCCC TCATACACGG CGGTGGACAG GAAAGAGGGC TCAGATCTGG AACGCAGAAT
GTTCCGGGAA TCGTCGGAGC AGCCCGCGCT ATGGAAATTG CCGTTGAAGA GCTGAGCGAA
GCAGCAAAAC ACATGGAAAA GCTCAGAAGC AAACTCGTAT CGGGTCTGAT GAACCTGGGA
GCCCACATCA TAACTCCCCT GGAGATATCC CTTCCCAACA CCCTCTCCGT CTCTTTTCCG
AACATCAGAG GTTCCACTCT TCAGAATCTT CTCTCCGGCT ATGGTATTTA CGTTTCAACC
TCATCGGCCT GCACCAGCAA GGACGAAAGA TTGAGCCATG TCCTGGATGC GATGGGGGTA
GACAGGAGAA TTGCCCAGGG AGCCATCAGA ATCAGCCTCT GCAAATACAA CACGGAGGAA
GAAGTGGATT ACTTCCTCAA GAAAATCGAA GAAATTCTCA GTTTTCTGGA TTTAACTGGA
AATAATCGCC GATAA
 
Protein sequence
MRVYFDNNAT TRVDDRVLEE MIVFYREKYG NPNSAHGMGI EANLHMEKAR EKVAKVLGVS 
PSEIFFTSCA TESINWILKT VAETFEKRKR TIITTLIEHK AVLETMKYLS MKGFKVKYVP
VDSRGVVKLE ELEKLVDEDT FLVSIMAANN EVGTIQPVED VTRIVKKKNK EALVHVDAVQ
TIGKIPFSLE KLEVDYASFS AHKFHGPKGV GITYIRKGVP IRPLIHGGGQ ERGLRSGTQN
VPGIVGAARA MEIAVEELSE AAKHMEKLRS KLVSGLMNLG AHIITPLEIS LPNTLSVSFP
NIRGSTLQNL LSGYGIYVST SSACTSKDER LSHVLDAMGV DRRIAQGAIR ISLCKYNTEE
EVDYFLKKIE EILSFLDLTG NNRR