Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tpet_0988 |
Symbol | |
ID | 5171347 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermotoga petrophila RKU-1 |
Kingdom | Bacteria |
Replicon accession | NC_009486 |
Strand | - |
Start bp | 1017775 |
End bp | 1018929 |
Gene Length | 1155 bp |
Protein Length | 384 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 640563506 |
Product | cysteine desulfurase |
Protein accession | YP_001244582 |
Protein GI | 148270122 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1104] Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.00170746 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGGGTTT ATTTTGACAA CAACGCAACG ACGAGGGTGG ACGATCGGGT TCTCGAAGAG ATGATTGTTT TCTACCGCGA AAAGTATGGA AATCCCAATT CTGCTCACGG CATGGGTATA GAGGCGAATT TACACATGGA AAAAGCGAGA GAAAAGGTGG CAAAGGTACT CGGTGTCTCA CCTTCAGAAA TATTCTTCAC CTCCTGTGCA ACGGAGTCGA TAAACTGGAT TCTCAAAACG GTCGCTGAGA CGTTCGAAAA AAGAAAAAGA ACCATCATCA CAACTCTCAT AGAGCACAAA GCCGTTCTCG AAACGATGAA ATATCTATCG ATGAAAGGTT TCAAAGTGAA GTACGTTCCC GTTGATTCCA GAGGTGTTGT GAAACTGGAA GAACTGGAAA AACTTGTAGA TGAGGACACG TTCCTTGTCA GCATCATGGC TGCGAACAAC GAGGTGGGAA CTATCCAGCC CGTTGAAGAT GTGACTAGGA TAGTGAAGAA AAAGAACAAA GAGGCCCTCG TTCATGTCGA TGCCGTTCAG ACGATAGGGA AAATTCCATT TTCCCTCGAG AAACTGGAAG TGGACTACGC GAGTTTCAGC GCGCACAAAT TTCACGGACC GAAAGGCGTT GGAATAACCT ACATCAGGAA GGGAGTTCCT ATCAGACCCC TCATACACGG CGGTGGACAG GAAAGAGGGC TCAGATCTGG AACGCAGAAT GTTCCGGGAA TCGTCGGAGC AGCCCGCGCT ATGGAAATTG CCGTTGAAGA GCTGAGCGAA GCAGCAAAAC ACATGGAAAA GCTCAGAAGC AAACTCGTAT CGGGTCTGAT GAACCTGGGA GCCCACATCA TAACTCCCCT GGAGATATCC CTTCCCAACA CCCTCTCCGT CTCTTTTCCG AACATCAGAG GTTCCACTCT TCAGAATCTT CTCTCCGGCT ATGGTATTTA CGTTTCAACC TCATCGGCCT GCACCAGCAA GGACGAAAGA TTGAGCCATG TCCTGGATGC GATGGGGGTA GACAGGAGAA TTGCCCAGGG AGCCATCAGA ATCAGCCTCT GCAAATACAA CACGGAGGAA GAAGTGGATT ACTTCCTCAA GAAAATCGAA GAAATTCTCA GTTTTCTGGA TTTAACTGGA AATAATCGCC GATAA
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Protein sequence | MRVYFDNNAT TRVDDRVLEE MIVFYREKYG NPNSAHGMGI EANLHMEKAR EKVAKVLGVS PSEIFFTSCA TESINWILKT VAETFEKRKR TIITTLIEHK AVLETMKYLS MKGFKVKYVP VDSRGVVKLE ELEKLVDEDT FLVSIMAANN EVGTIQPVED VTRIVKKKNK EALVHVDAVQ TIGKIPFSLE KLEVDYASFS AHKFHGPKGV GITYIRKGVP IRPLIHGGGQ ERGLRSGTQN VPGIVGAARA MEIAVEELSE AAKHMEKLRS KLVSGLMNLG AHIITPLEIS LPNTLSVSFP NIRGSTLQNL LSGYGIYVST SSACTSKDER LSHVLDAMGV DRRIAQGAIR ISLCKYNTEE EVDYFLKKIE EILSFLDLTG NNRR
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