| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpet_0969 |
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| Symbol | |
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| ID | 5171436 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermotoga petrophila RKU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009486 |
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| Strand | + |
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| Start bp | 1003526 |
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| End bp | 1004947 |
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| Gene Length | 1422 bp |
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| Protein Length | 473 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640563487 |
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| Product | alpha amylase, catalytic region |
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| Protein accession | YP_001244563 |
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| Protein GI | 148270103 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0366] Glycosidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATGTACC CGATGCCGTC TTGGGTTTAC GACAGTGTCG TGTATCAGAT CTTTCCAGAT
AGATTCTTCA TCGGAAAGGG AAAAACGGTG GAAGACAAAA AGGATCTGTA CCTGAAGCGG
GGAGGAGTCA TAGAGAAATG GGGAGTTCCT CCCCGCAAAC TTCCCGGTGC TCAGCACGTG
AAGATCTTCT ACGGAGGAGA TCTGTGGGGA ATAGCCGAGA AGGTCGATTA TTTTGAAGAA
CTTGGAATCA ACGTTCTGTA CCTCACTCCT ATCTTTTTGT CCGATACCAA TCACAAGTAC
GACACAATCG ATTACTTCAG AGTGGATCCA CAGTTCGGTG GAAAGAGGGC TTTTCTGCAC
CTTTTGAGGG TTCTCCATGA GAGGAGTATG AAACTCATTC TCGATGGTGT GTTCAACCAC
GTTGGGAGTC AGCATCCGTG GTTCAAAAAA GCGAAGAAAA ACGATCCAGA GTACGTGAAC
AGATTTTTCC TTTACAAAGA TAGGCACAGA TCGTGGTTCG ACGTTGGAAG CCTTCCCGAG
CTGAACGTGG AAGTCGAAGA AGTGAAGGAA TACATTTTGA AAGTTGTCGA GCACTACCTG
AAACTGGAGA TAGACGGTTG GAGGCTGGAT TGCGGCCACG ATCTTGGACC TACCGTCAAC
CTGTGGATCA ACATGAAAGT GAAAGAGTTC TCAGCAGAAA AGTACCTCGT GAGTGAGATA
TGGACTTACC CGGCAGGATG GGATATGGTT GATGGTCTGA TGAACTACAA CTTCAGAAAC
CTCGTGCTGA GCTATGTGAA CGGCGAGACG GATTCCATAG GTTTTCACCT GGAAAGAGCT
TACAGGGAGA CGAAGAACAT ATTCGGTTGC TGGAACATGC TTGACAGTCA CGACACCCCG
AGACTCGCCA CAATGGTTCC CGACAGAGAC CTGAGAAAAC TCGCTGTAGT TCTTCAGTTC
ACTTATCCCG GTGTTCCGCT CGTTTACTAT GGAACAGAGA TAGGTCTCAC AGGTGGAGAA
GATCCAGAGT GTCGTGCCAC CATGGAATGG AACAGAGAGA AATGGGATGT TGATCTGTTC
GAGTTCTACA AGAAGATGAT CAGACTGAGA AGGACGGATC CAGGTTTGCG CTTTGGAGAG
TTTGTCTTGC TGAACGACTC ACCTCTCGCG TTTCTCAGAA AGGCTCCTCA TCCTCTTCAA
AACACCATCG TGGTGGTGAA CCCAGGAGAA GAGAAGGTGC TGGTTCTCTC CATTCCCGAC
GGGAAAATTA TGAACACCAC TCCCCTTGTC GATGTGTTCA GCGGAGAAAG ATTCCACGTT
GACGGCGGGG TTGTGAAGCT TCCCCTTCCA GCGAGATCTT TCAGAATTCT CAAGCCCGAG
GATCTGAGAG TGGGTAAGTA CAGATTGTAC AAGAGAGTTT GA
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| Protein sequence | MMYPMPSWVY DSVVYQIFPD RFFIGKGKTV EDKKDLYLKR GGVIEKWGVP PRKLPGAQHV
KIFYGGDLWG IAEKVDYFEE LGINVLYLTP IFLSDTNHKY DTIDYFRVDP QFGGKRAFLH
LLRVLHERSM KLILDGVFNH VGSQHPWFKK AKKNDPEYVN RFFLYKDRHR SWFDVGSLPE
LNVEVEEVKE YILKVVEHYL KLEIDGWRLD CGHDLGPTVN LWINMKVKEF SAEKYLVSEI
WTYPAGWDMV DGLMNYNFRN LVLSYVNGET DSIGFHLERA YRETKNIFGC WNMLDSHDTP
RLATMVPDRD LRKLAVVLQF TYPGVPLVYY GTEIGLTGGE DPECRATMEW NREKWDVDLF
EFYKKMIRLR RTDPGLRFGE FVLLNDSPLA FLRKAPHPLQ NTIVVVNPGE EKVLVLSIPD
GKIMNTTPLV DVFSGERFHV DGGVVKLPLP ARSFRILKPE DLRVGKYRLY KRV
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