| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpet_0967 |
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| Symbol | |
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| ID | 5171109 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermotoga petrophila RKU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009486 |
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| Strand | + |
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| Start bp | 999298 |
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| End bp | 1001031 |
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| Gene Length | 1734 bp |
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| Protein Length | 577 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640563485 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_001244561 |
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| Protein GI | 148270101 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1175] ABC-type sugar transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0000132782 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAAAGGGC TTCTCAAAAT CTTTCTGATA TTGTTTCTCG CTGTATTCAA CTCAGGAATG
GTATGGGCAG GAATTTTCCT GCTTCAAAAT TCTTATTATG AACTTGGAAT CGTTCTTCTC
ACGCTTCTCG TACTCATAGA TTACTTCATT TTCAATCCGA AGGCTTACCC TTACAGATAC
ACCATTCCCG CTTTGATATT ACTTTTTGTG CTCGTTCTCT ATCCTATATA TTTCACTGTG
AAGGTTGCGT TCACCAATTA TGGAACAGGA CACCTCATGA CGAAACAAGA GGCCATCGAG
AGAATTCTTT TCGACCCAAA TTACACTTAT GTTCCAGAGA GCGCTGAACC TGTTGAATAC
ATGGTCTTCT CCGTGTTCGA TGGTCTGAAT CCTACCGAGG ATTTTGTTGT TCTCTTCGAG
AAAGATGGGA ACATCTACAT CGCGGAGCGC CCCGTTGTCG CAAAGAGGAG TGGGAAAGAA
GTCCTTTTGA GAGAGTCAAC TCTTTTTCCC GTGAAGGATG GAACCGCCGA AGTGAATGGA
AAGGTTTATG AAATAGTCCC CTGGCCCGCT TCCATAAAAG AGGTGAACGC CGTCTATTCA
GACGGTAAAA TTTACAAACC GCTTTACTCA CCTGAAGAGG TTTCCCTGAA GAGGTACGAA
CCTTTCTTCA AGGTAAATGT GGTTCAGAAG TATCTCAACA GGGCGGAGTT TTGGCTCGAG
GATCAAAGTT ACATGTTCAG AATAGGTGAA AATGGGGAAT GGAACTTTTA TCCAGTGAAG
AGGATTTACT CTCTGTCTTT CGAAGAATCC CTCGAAAACG GAAGGATAAC AACGAAACTT
GTGGTGAAAA ACAATCTCAC TGGAAGGCAT CTCGTTGAGA GAGAAGGTGC TTTTTACGAT
TACGATGAAA ATGGAAGAGA ATTTTTCGTG ATTGGATACA TGGAATACAT TGGTTTCAAG
AACTTCTCCA GGATATTCAC CGATCCGAAG ATCGCTGGTC CTTTTTTCAA GGTTTTCACC
TGGACGTTCA CCTGGGCTGC TCTCAGTGTT CTTTTCACGT TCGCGATAGG TCTTTCCCTC
GCTCTTGTTC TGAACGATAA AACACTGAAG GGAAAGAACG TGTACAGGAC GTTACTCATT
ATTCCATGGG CTGTGCCAGC TTTCATTTCC GTTCTCGTCT GGAGAAACGG AATGTTCAAC
GAGACTTATG GAATTCTCAA CCGATTTGTT CTTCCGTTCT TGGGATTGGA TCCGGTGAAG
TGGTTCAACG ATCCGTTCTG GGCGAAGGTT GCCGTTCTCA CCGTCAACAC GTGGCTGGGA
TTTCCGTACA TGATGGCCGT CTCACTCGGA GCTTTGCAGA GCATTCCAGA GGAGCTCTAC
GAAGCCGCTG CGATCGATGG AGCTGGAAAA TGGAGGAGAT TCTGGACCAT CACGTTTCCG
CTTCTGATGA CCACTGTGGC TCCTCTGTTG GTCGGAAGTT TTGCTTTCAA CTTCAACAAC
TTTGTGAACA TATACCTGCT CACCGGTGGA GGTCCCGCGA TGCCCGGAAC CACGACCCCT
GTTGGTCACA CCGACATTTT GATCTCATAC GTTTACAAGC TCGCTTTTGA GGGAGGAAGG
GGACAGGACT TCGGTTTTGC CAGCGCCATA TCCATCATTA TATTCTTCCT CGTTGGTGGA
ATCAGCTTCG TGAACTTCAA ACTCTCTGGT GCGTTTGAAG AGGTGAGTGA ATGA
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| Protein sequence | MKGLLKIFLI LFLAVFNSGM VWAGIFLLQN SYYELGIVLL TLLVLIDYFI FNPKAYPYRY
TIPALILLFV LVLYPIYFTV KVAFTNYGTG HLMTKQEAIE RILFDPNYTY VPESAEPVEY
MVFSVFDGLN PTEDFVVLFE KDGNIYIAER PVVAKRSGKE VLLRESTLFP VKDGTAEVNG
KVYEIVPWPA SIKEVNAVYS DGKIYKPLYS PEEVSLKRYE PFFKVNVVQK YLNRAEFWLE
DQSYMFRIGE NGEWNFYPVK RIYSLSFEES LENGRITTKL VVKNNLTGRH LVEREGAFYD
YDENGREFFV IGYMEYIGFK NFSRIFTDPK IAGPFFKVFT WTFTWAALSV LFTFAIGLSL
ALVLNDKTLK GKNVYRTLLI IPWAVPAFIS VLVWRNGMFN ETYGILNRFV LPFLGLDPVK
WFNDPFWAKV AVLTVNTWLG FPYMMAVSLG ALQSIPEELY EAAAIDGAGK WRRFWTITFP
LLMTTVAPLL VGSFAFNFNN FVNIYLLTGG GPAMPGTTTP VGHTDILISY VYKLAFEGGR
GQDFGFASAI SIIIFFLVGG ISFVNFKLSG AFEEVSE
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