Gene Tpet_0962 details

Gene Information

• Locus tag: Tpet_0962
• ID: 5171225
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Thermotoga petrophila RKU-1
• Kingdom: Bacteria
• Replicon accession: NC_009486
• Strand: -
• Start bp: 994084
• End bp: 994746
• Gene Length: 663 bp
• Protein Length: 220 aa
• Translation table: 11
• GC content: 48%
• IMG OID: 640563480
• Product: hypothetical protein
• Protein accession: YP_001244556
• Protein GI: 148270096

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 0.000381953
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGATCTCCT TGAAAAAGAT AATCCCAGCT CTTTTACTGA TTACGTTTCT TTCTGGATGT 
ATGACACTGC TCAATATAAA GCTCCCGGAC GGTGTTTATG TGGTTGGAGA TTTCTCAAAC 
GGTGTGCCGA GCTCCGAATA CAAAATGGCG CTTCAGGGTG ATTTCTACAC CCTGGAGCTT 
CCTTCTTCCG TTTTGAGCTT TGAAAATGAC ATCGCCTGGT ATCAGGTTGT GGTTGTTGAA 
AACGGAAAAC CAGTGAAGAC CACTTCCGAG ATTCCTCTGT GGAAACAGCT CGTTGGAGCC 
ACCGTCACCA TATACGCAAC ACCGAACCTG ATGGAAAACG ACACAGCAAA GGGAGTGGGA 
GACTCTGAGA AAGAAACACC TCCCTGGTAC TGCGCCGGAG ATTTCAACAA CTGGACGCTC 
GAAGAGATGA CCTACCAAGA TGGAAAGTTT GTTTTGAACA CAGGCCGCAC CGTCTCTTCC 
GGTGAAACGA TACAATACAA AATCGCAAGA AACACCGACT GGACTCCTTA CGAAGAACAG 
TTCGATGGAA CCAGTTACGA AGCCGGATAC GGTAAAAACG CCACCTTCAC CGCGGACAAA 
GACGGAACTT TCGTCATAGA ATTCGATCCG AAAACGAGCA CACTTCAAGC CTATGTGGAG 
TGA 

 

Protein sequence

MISLKKIIPA LLLITFLSGC MTLLNIKLPD GVYVVGDFSN GVPSSEYKMA LQGDFYTLEL 
PSSVLSFEND IAWYQVVVVE NGKPVKTTSE IPLWKQLVGA TVTIYATPNL MENDTAKGVG 
DSEKETPPWY CAGDFNNWTL EEMTYQDGKF VLNTGRTVSS GETIQYKIAR NTDWTPYEEQ 
FDGTSYEAGY GKNATFTADK DGTFVIEFDP KTSTLQAYVE