| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpet_0948 |
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| Symbol | |
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| ID | 5171173 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermotoga petrophila RKU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009486 |
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| Strand | + |
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| Start bp | 970947 |
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| End bp | 973979 |
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| Gene Length | 3033 bp |
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| Protein Length | 1010 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640563466 |
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| Product | glycoside hydrolase family protein |
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| Protein accession | YP_001244542 |
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| Protein GI | 148270082 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0383] Alpha-mannosidase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAAAGGCC GATTGTGGAG AATGCTCTCA GAGATTGTTC CGTATACTTT TCTGAGAAGA
GAAAGAATAG AAAGCTGGGT TTTCTCCGAT GATGCTGTTG AGAAAACCGT GGATCCTCCC
TTCGAATGGA ATTTCAACTC CGCTCCTGTT TGGTTCAGAA AGGGTCTGTC CCCCTTCTCT
GTCGACGGGG GACAGAGGGC TTACCTGAAA CTCTGGTTCG GTGGGGAGAC CCTTGTTCTT
GTGGATGGGA AACCTTACGG GGAAATCAAT GAGTACCACA GGATACTGAA CATCACACCA
CTTGCTGATG GTAAACCACA TACAATAGAA GCTCAGGTGA TGCCAAGGAG TCTTTTTGGA
AGACCGGAAA AGCCAGTATT CACGGAAGCT TTCTTCATCG TCGTCGATGA AGCGTTGATG
AAGGTGGTGA AAACGCTCGA ACTCACCATA AAGACGGCGG AAGTTGTAGA AGACGAGTCG
CTTTCTAAGA AACTGCTGGA TATCTCCGAA GAGTTTCTCT CGAAAGTCTG GGTTCCACGA
GACACAGATA CCTATCTGAT GACGGCACCG GAAGATCCGG GAATAAAAGA TGAGATCAAG
AACACTTGGA GCACACCAGA GTTCAAAGAG TTCACAGGTG TGAAGCTTCC TGAAGAGTTG
AGAAACCAGA TTCTGAAAGA GTTCGAAAAA TTCAAAGAGA AGCTGGACAA AATAAAGAAA
GACCACCCGG GTTCTGGGAC GATCCGCCTT GTCGGTCACG CACACATAGA CTATGCCTGG
CTTTGGCCCG TGGAGGAGAC GAGACGGAAG ATCCTTCGCA CCTTCGCAAA CTCCGTGTTG
CTCTCTAAGC TCTATCCAGA GTTCGTTTAC ACCCAGTCTT CTGCTCAAAT GTACGAGGAT
CTCAAACAAA ATTCACCGGA ACTCTTCGGG GAAGTGAAAA AGCTCGTAGA AGAGGGTAGA
TGGGAACCAG TCGGTGGCAT GTGGGTGGAG TCGGACTGCA ACATCCCATC GATAGAGTCC
CTTGTGAGGC AGTTCTACTA CGGTCAAAAG TTTTTCGAAA GAGAATTCGG GAGAAAGAGC
AGAGTATGCT GGCTACCGGA TGTGTTCGGT TTCTCCTGGG TACTTCCTCA GATTCTGAGA
GACGTGGGAA TAGAGTACTT TGTCACTACG AAACTCAACT GGAACGACAC GAACGAGTTT
CCATACGATC TGTGTCGTTG GAGGGGAATA GATGGATCCG AAGTTATCTA TTTCAGCTTC
AAAAATCCCA ACGAGGGATA CAACGGGAGG ATAGATCCCG ATACGATCTA CAGGACCTGG
AAGAATTTCA AGCAAAAAGA TCTCACAAAC AGAGTTCTTC TTTCGTTCGG ACATGGTGAT
GGCGGTGGCG GCCCAACCGA AGAGATGCTG GAAAATTACG AAGTTCTGAA GGATTTTCCT
GGACTGCCGC GCCTTGAAAT GGGAACTGTG GAAGAATTTT TCGAGAAAAT GAAGATCGAC
GGAGAACTTC CTGTGTGGGA CGGAGAGCTT TACCTTGAAC TTCACAGGGG AACCTACACT
TCTCAGTCCA AGACAAAGAA ACTTCACAAA GAAGCGGAAG ACAGCCTTTA TCTTGCAGAG
TTGATCTCGG CTTTCACGGA TAAGGATTTT TCAGACGAAA TAGACGAACT CTGGAAAATT
CTACTGAGAA ACGAATTTCA CGATATTCTG CCTGGATCTT CTATAAAGGA AGTCTATGAA
GATACAGAAA AAGAACTCAG ACAGGTGATA GAAAAATCAA AAGGCATCAT TGTCGAATCT
CTCAAAGTTC TTTCTTCTGA GAACGAAGAG GTTTTAACCC TTTTGAACGT TTCTTCGTTT
CCAAAGAAGT GTCTTTTCTT CCTCAACGAA GATCTTGAGA TCTTCCTCGA AGGAGAAGCG
CTCTTGAAAC AGAAAACCCA CGATGGAAGG TATGTGTACT TCATAGACAG AGAAATTCCA
CCGTTCACGA AAGTGGAACT GAAGGTTCGC AAAGCCACGT CTGAGGAAAC TCCAAATGAG
TTGAGAGAAG CGAACATCAT GGAGAACGAG TTTCTCAGGG TGTACGTCAA CGATGACGGA
ACGGTTCAGA TCTACGATAA GGAACTGGAT AGGTACGTTT TCGAAGAAAA GGGAAACGTC
TTGAAACTCC ACAAAAACAT TCCCACTTAC TGGGACAACT GGGATATCGC AGAAAACGTA
GAAAAGACAG GATATACCCT GAGTGCGAAA AACATAGAAA AAATAGAATC TGGTCCTGTT
CGGGAGGTGA TCCGCGTCGA ATACGAGGCG GAAGGAAGCA AGATTATACA GCATTACATC
CTCTACAGGA AAAGCAGAAG GCTCGATATA GAAACGAAGG CAGACTGGCA CACAAGACGT
GCGCTTCTCA GGGCTTACTT CCCAACAACT GTTTTGTCGA GAAAGGCAAG GTTCGATATC
TCCGGTGGTT TCATCGAAAG GCCCACGCAC AGAAACACCA GTTTCGAACA GGCGCGTTTC
GAGGTGCCGT TTCACAGGTG GATGGATCTT TCCCAGACAG ATTTTGGTGT ATCCATCCTG
AACGACGGAA AATACGGTGG CAGTGTTTAT CAAGACACCA TGGCACTTTC GCTGATAAAA
GCGGGTATTT TCCCCGACTT TCTCTGTGAC GAAGGCGAAC ACAATTTCAC CTATTCTGTC
TACGTACACC CCGGAGACAG CTTGAGAGAT GTTGTAAAAG AATCAGAAGA GCTCAACAAG
TCTTTCATCG TTCATCATGG GATGTTGAAC CTTCCCTCTC CCTTACTGGA GATTTCTCCT
CGAAATTTCC GTCTCACTTC ACTGAGAAGG GTGAAGGACA GAATTGTTCT GAGGCTTGTT
GAGATCTTTG GAACATCAGG GAAACTTTCC ATTAAGACTC CGTGGAACGG TGAGATCTAC
CAGACGAACC TTCTGGAAGA GAAGAAGCAA AAAGTAGCCT TCCCAATGGT TTACCATCCG
TTCAAGATCT ACACCTTCGT TGTAGAAGAT TGA
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| Protein sequence | MKGRLWRMLS EIVPYTFLRR ERIESWVFSD DAVEKTVDPP FEWNFNSAPV WFRKGLSPFS
VDGGQRAYLK LWFGGETLVL VDGKPYGEIN EYHRILNITP LADGKPHTIE AQVMPRSLFG
RPEKPVFTEA FFIVVDEALM KVVKTLELTI KTAEVVEDES LSKKLLDISE EFLSKVWVPR
DTDTYLMTAP EDPGIKDEIK NTWSTPEFKE FTGVKLPEEL RNQILKEFEK FKEKLDKIKK
DHPGSGTIRL VGHAHIDYAW LWPVEETRRK ILRTFANSVL LSKLYPEFVY TQSSAQMYED
LKQNSPELFG EVKKLVEEGR WEPVGGMWVE SDCNIPSIES LVRQFYYGQK FFEREFGRKS
RVCWLPDVFG FSWVLPQILR DVGIEYFVTT KLNWNDTNEF PYDLCRWRGI DGSEVIYFSF
KNPNEGYNGR IDPDTIYRTW KNFKQKDLTN RVLLSFGHGD GGGGPTEEML ENYEVLKDFP
GLPRLEMGTV EEFFEKMKID GELPVWDGEL YLELHRGTYT SQSKTKKLHK EAEDSLYLAE
LISAFTDKDF SDEIDELWKI LLRNEFHDIL PGSSIKEVYE DTEKELRQVI EKSKGIIVES
LKVLSSENEE VLTLLNVSSF PKKCLFFLNE DLEIFLEGEA LLKQKTHDGR YVYFIDREIP
PFTKVELKVR KATSEETPNE LREANIMENE FLRVYVNDDG TVQIYDKELD RYVFEEKGNV
LKLHKNIPTY WDNWDIAENV EKTGYTLSAK NIEKIESGPV REVIRVEYEA EGSKIIQHYI
LYRKSRRLDI ETKADWHTRR ALLRAYFPTT VLSRKARFDI SGGFIERPTH RNTSFEQARF
EVPFHRWMDL SQTDFGVSIL NDGKYGGSVY QDTMALSLIK AGIFPDFLCD EGEHNFTYSV
YVHPGDSLRD VVKESEELNK SFIVHHGMLN LPSPLLEISP RNFRLTSLRR VKDRIVLRLV
EIFGTSGKLS IKTPWNGEIY QTNLLEEKKQ KVAFPMVYHP FKIYTFVVED
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