Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tpet_0940 |
Symbol | |
ID | 5170273 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermotoga petrophila RKU-1 |
Kingdom | Bacteria |
Replicon accession | NC_009486 |
Strand | + |
Start bp | 960757 |
End bp | 962280 |
Gene Length | 1524 bp |
Protein Length | 507 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 640563458 |
Product | phosphodiesterase |
Protein accession | YP_001244534 |
Protein GI | 148270074 |
COG category | [R] General function prediction only |
COG ID | [COG1418] Predicted HD superfamily hydrolase |
TIGRFAM ID | [TIGR00277] uncharacterized domain HDIG [TIGR03319] conserved hypothetical protein YmdA/YtgF |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.00000000513456 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTGTGGT ACATAGTAGC AGGAGCCGGT GGTCTTCTGA TTGGATACTT AATAGCAAGT TATCAGATAA ATCAAAAGCT CAGAAAAGCG AAAGAAGACG CTCAAACCAT AATCGAGAAA GCAGAAAAAG AAGCAAACGA GATAAAAAAG AAAGCGATAA TAGAAGGAAG AGAGGAAGTT CACAGGCTCA GAGAGGAATT CGAGAAAGAG CGATCCAGAA GAGAAGAAGA ATTGAGAGCG TTTGAGGAAA GAATTTTAAA GAGAGAAGAA CTCCTGACGA GGAAAGAGGA AAACCTTGAA AAAAGGGAAC ATCAGATTGA GGAACTCAAA GCAAATCTGG AAGAGAAAAT GAGAGAGGTC GAAGAAAAGG AAAAAAGAAT CGACGAAGAA TTGAAGCGTC TTGCCGGTAT GACTGTGGAA GAAGCAAGAG AGCTCATTCT CGAAGAAGCC AGGCAGAGGT ACGAACACGA CCTTGCGAAA CTCTACAAAG AGATGAAAGA ACAGGTTGAA GAAGAAGTCG AAAAGGAAGC CAAGAAAGTC ATAGCATTCG CTGTTCAGAG ATACGCACCG GATTATGTAG GAGAAATCAC CGTTTCTACC GTTTCACTTC CGTCGGACGA CATGAAGGGA AGAATCATAG GCAGAGAAGG AAGAAACATC AGAACGTTTG AAAAGATCAC GGGTGTGGAC TTGATAATAG ACGACACCCC GGAAGTGGTG GTTCTTTCCT GCTTTAACCC TCTGAGAAGA GAGATAGCCC GTATCACACT GGAAAAACTG GTGGCGGATG GAAGAATACA TCCTGCAAGG ATCGAAGAAA TGTACGAAAA AGCAAAGCAG GAAGTGGAGA AAGCCATAAA AGAAGCTGGA CAAGAGGCGA CGTTCAAAGC GGGTGTTATG GGGCTCCATC CGGAGCTTGT GAAACTCCTT GGAAAATTGA AATACAGAAC GAGCTATGGC CAAAACGTTC TGAACCATTC GATAGAAGTG GCTCTGCTCG CCGGTTACAT GGCTTCTGAA CTTGGGCTAA ACGCGGACAA AGCGAGAAGA GGAGGACTCC TCCACGATAT AGGAAAAGCT GTTGATCAGG AGCTGGAAGG TTCACACACG ACCATAGGTG CAGAGCTTGC CCGAAGATAC GGAGAAAAAG AAGACATCAT AAACATGATT CTCAGCCATC ACGGAGAAGA AGAACCCATG ACACCTGAAG CAGTACTCGT GGCAGCTGCC GATGCTCTCT CTGCGGCAAG ACCAGGTGCG AGAAGAGAGA GTCTGGAAAA CTACATCAAA CGTCTTATGA AGCTGGAGGA GATAGCAAAA AGCTTCAAGT ACGTTGAAAA GGCCTACGCC ATTCAGGCTG GAAGAGAAAT TAGAGTGATT GTGGAACCCG ACAAAGTGGA TGACGCTCTC GCTGAAAAAC TCGCCTACGA TATTTCTAAA AAGATAGAAG AAGAGCTCGA GTATCCTGGT GTTCTGAAAG TTGTGGTGAT AAGAGAGAAA AGAAGCGTCG CTTACGCAAA GTAA
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Protein sequence | MLWYIVAGAG GLLIGYLIAS YQINQKLRKA KEDAQTIIEK AEKEANEIKK KAIIEGREEV HRLREEFEKE RSRREEELRA FEERILKREE LLTRKEENLE KREHQIEELK ANLEEKMREV EEKEKRIDEE LKRLAGMTVE EARELILEEA RQRYEHDLAK LYKEMKEQVE EEVEKEAKKV IAFAVQRYAP DYVGEITVST VSLPSDDMKG RIIGREGRNI RTFEKITGVD LIIDDTPEVV VLSCFNPLRR EIARITLEKL VADGRIHPAR IEEMYEKAKQ EVEKAIKEAG QEATFKAGVM GLHPELVKLL GKLKYRTSYG QNVLNHSIEV ALLAGYMASE LGLNADKARR GGLLHDIGKA VDQELEGSHT TIGAELARRY GEKEDIINMI LSHHGEEEPM TPEAVLVAAA DALSAARPGA RRESLENYIK RLMKLEEIAK SFKYVEKAYA IQAGREIRVI VEPDKVDDAL AEKLAYDISK KIEEELEYPG VLKVVVIREK RSVAYAK
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