| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpet_0937 |
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| Symbol | |
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| ID | 5171007 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermotoga petrophila RKU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009486 |
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| Strand | + |
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| Start bp | 958716 |
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| End bp | 959279 |
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| Gene Length | 564 bp |
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| Protein Length | 187 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640563455 |
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| Product | 2'-5' RNA ligase |
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| Protein accession | YP_001244531 |
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| Protein GI | 148270071 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1514] 2'-5' RNA ligase |
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| TIGRFAM ID | [TIGR02258] 2'-5' RNA ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.00000000195897 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAGGACCT TCATTGCTAT CGATGTTAAC GAAGAAGTCA AGAAGCAAGC TTCTGAAATC
ATAGAAAAAC TCATGAGAAG AGGTTTTGGT GCAACGTGGG TTTCTGAAGA AAACATGCAC
CTCACACTTT TTTTCCTGGG GGAGGTTGAC GAACAAAAAA TCTCTGAAAT AGCCGAACAC
CTCTGTAGAA GGGTGAGAGG TTTTCCTTCT TTTTCGTTCA CCGTGAAGGG TTTTGGGTAC
TTCAAAAGGA AGATGTCTCC GCGCGTCTTC TGGCTCGGAG TGGAGAACAC TGATCGCCTG
ATGAAACTCT ACGAAGAGCT CAGAAACGAG CTGTCTCACC ACGGTTTTTC GTTTGAAGAG
AAGTTCGTCC CTCACATTAC GATTGGAAGG GTGAAGTACT ACCCGGACAA ATGGGAAAAA
CTGATCGAAG ACATCGATTT TCCACCCATC GAAGTTGCTG TGGACAGATT CAAGATTTAC
TCGTCCACGT TAACACCGAC GGGTCCCATC TACAGAGTTC TTTACGAATG CCAGTTTGAA
GGAGGATTGA TCAGGTATGT CTGA
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| Protein sequence | MRTFIAIDVN EEVKKQASEI IEKLMRRGFG ATWVSEENMH LTLFFLGEVD EQKISEIAEH
LCRRVRGFPS FSFTVKGFGY FKRKMSPRVF WLGVENTDRL MKLYEELRNE LSHHGFSFEE
KFVPHITIGR VKYYPDKWEK LIEDIDFPPI EVAVDRFKIY SSTLTPTGPI YRVLYECQFE
GGLIRYV
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