Gene Tpet_0929 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpet_0929 
Symbol 
ID5171211 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermotoga petrophila RKU-1 
KingdomBacteria 
Replicon accessionNC_009486 
Strand
Start bp952112 
End bp952927 
Gene Length816 bp 
Protein Length271 aa 
Translation table11 
GC content48% 
IMG OID640563447 
Productcobalt transport protein 
Protein accessionYP_001244523 
Protein GI148270063 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0619] ABC-type cobalt transport system, permease component CbiQ and related transporters 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000291148 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGACTGC CGACGGTTCT GATAGGAAGA TATATTCCGG TTGATTCGAT TGTTCACAGA 
CTCGATCCAA GAGCGAAACT CCTGGGTATG ATCTTTCTCA TTTCCGCTGT GCTGATCGTA
CCCAATCTTT TGTTTTACCT CGTACCGGGT TTGGCTATCT TTCTTTTGAT GTTTCTGAGC
AGAACAGGAT TCAAGATTTA CCTTGCGGGA CTCAGGAGTC TCTGGTTCTT CCTTGTGTTT
GCGGTTCTGG TTCAGTTCTT TTCCTCATCA GAGGGTGAAA AGATCTTCTG GATGATCACC
GACAGAGCCA TATGGTCTGC CGTTTACATT ATGCTCAGAC TGGTGCTCAT AATCCTCCTT
GCTGAGAATT TCTCTGCCAC CACTCCGCCC TTGCTTTCTG CCAGGGCTAT AGAGAGTATC
TTCTCGACGT TCGGTGCCAG AAAAATCGGC CATGAGATAG GAATGGTGAT GACCATTGCG
ATGAGGTTCG TTCCTGTTTT GGCGCTCGAG GCGGATAGGA TCTTGAAGGC CCAGATTGCC
AGGGGGGCAA ACTTCGAAAG GGGAAAGTTT TTCGACAGAA TAAGAGCGCT TGTGGTGATA
ATAGTGCCCC TTCTCATATC GGCCCTCAGA AAAGCAGAAG AACTGGCTGT GGCCATGGAG
GCTCGTCTCT ACACGGGCGA GCCTCCAAAA ACACGGTTCA AAGACATAAA GTGGAAACCG
ATGGACACAC TCTACGTCCT ATTAACCGCT GGTGTTCTGG TGCTTGTTCT CTTCGGCCGT
TATTTCGTTG ATGGCGTTTT TCAATATGGA AGCTGA
 
Protein sequence
MRLPTVLIGR YIPVDSIVHR LDPRAKLLGM IFLISAVLIV PNLLFYLVPG LAIFLLMFLS 
RTGFKIYLAG LRSLWFFLVF AVLVQFFSSS EGEKIFWMIT DRAIWSAVYI MLRLVLIILL
AENFSATTPP LLSARAIESI FSTFGARKIG HEIGMVMTIA MRFVPVLALE ADRILKAQIA
RGANFERGKF FDRIRALVVI IVPLLISALR KAEELAVAME ARLYTGEPPK TRFKDIKWKP
MDTLYVLLTA GVLVLVLFGR YFVDGVFQYG S