Gene Tpet_0921 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpet_0921 
Symbol 
ID5171341 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermotoga petrophila RKU-1 
KingdomBacteria 
Replicon accessionNC_009486 
Strand
Start bp944231 
End bp944995 
Gene Length765 bp 
Protein Length254 aa 
Translation table11 
GC content49% 
IMG OID640563439 
Productphosphodiesterase 
Protein accessionYP_001244515 
Protein GI148270055 
COG category[R] General function prediction only 
COG ID[COG0622] Predicted phosphoesterase 
TIGRFAM ID[TIGR00040] phosphoesterase, MJ0936 family 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.00301571 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGGCTTG CCTTCTTTGG AGATGTTCAT GGAAATTTCG AAGCGTTGAA GGCCGTTCTG 
GAGGACATGG AGAACAAAGG TGTCGATGAA GTGTTCTGCC TTGGAGATTT GGTCGGCTAT
GGACCCGATC CTGAAGCTGT TGTACAGACA ATCATGGAAA AAAACATCAA AACGATTATG
GGAAACTACG ACGATGCCGT TGGCTATTCC AAAGAGAGCT GTGGTTGTTC CTACGCGCCC
GGAAGGGAAA CAGAGGTTGG AGACATCTCC CTCAAGTGGT CGATCGAAAA CACTTCTGAG
AAAACCAGAG AATTTTTGAG AAATCTTCCC AAAAAGCTGA GTTTCGAAGT TGAAGGAGTC
AGATTCTTGC TCGTTCATGG AAGTCCTCTA AACGAACTCC TCGAGTACGT GAAGCCCAAC
ACTCCTCCAG ACAGGCTGAA GAAGATCGTG GAATCGGTCG AAGAGAATGT TGTTGTGAAC
GGACACACTC ACCTTCCCAT GGTGAAATGG GTTATGGGAA AGCTCGTTTT GAACCCAGGA
AGCGCCGGAA GACCGAAAGA CGGGGACCCG AGAGCGTCTT ACATGATCGT TGATGTTGAA
AACGGTACGG TCAGCTTTGA AATAGTGCGT GTCAGGTACG ATGTGAAGAC AACCGTAGAA
AAGATCGCAA GAAACGGCCT CCCAGTTGAA CTTGCGACCG TTCTGGCACT CGGACAAACG
TTCGACATGG GACCGGGAAA GGTCACTTTC ACCCTCGGCC GATGA
 
Protein sequence
MRLAFFGDVH GNFEALKAVL EDMENKGVDE VFCLGDLVGY GPDPEAVVQT IMEKNIKTIM 
GNYDDAVGYS KESCGCSYAP GRETEVGDIS LKWSIENTSE KTREFLRNLP KKLSFEVEGV
RFLLVHGSPL NELLEYVKPN TPPDRLKKIV ESVEENVVVN GHTHLPMVKW VMGKLVLNPG
SAGRPKDGDP RASYMIVDVE NGTVSFEIVR VRYDVKTTVE KIARNGLPVE LATVLALGQT
FDMGPGKVTF TLGR