| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpet_0919 |
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| Symbol | ushA |
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| ID | 5170783 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermotoga petrophila RKU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009486 |
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| Strand | - |
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| Start bp | 941897 |
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| End bp | 943423 |
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| Gene Length | 1527 bp |
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| Protein Length | 508 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640563437 |
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| Product | bifunctional UDP-sugar hydrolase/5'-nucleotidase periplasmic precursor |
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| Protein accession | YP_001244513 |
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| Protein GI | 148270053 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0737] 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.455321 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAGAAAGT TCCTGGTGAT CCTTCTGGCT TTATTGATAA CCGCTCTGCT TCTTGGTGCA
AGGCTCACCA TCCTTCACGT CAACGACACA CACGGTCACG CTTGGGCATT CGATGAGTAT
CGTAATCCCG GAATTGGGGG CCTTGCAGCC ATCGCAACGA TCGTAGAAGA GGTGAAAAGG
GAAGTCGAGA GTCAGGGTGG GTACGTGATC TTTCTCCATG CGGGAGACCT GAACACCGGT
GTTCCAGAGT CCGATCTTCA AGATGCCATA CCAGACATTG TTGGATTCAA CATGATAGGA
CTCAAAGCCA TGGCCGTTGG AAACCACGAG TTCGACAATC CAAGGGAAGT ACTCGAAAAA
CAGATGAAAT TCGCAGATTT TCCGTTCCTT TCAGCGAACA TAGTAAAAGA AGATGGTGAA
CCGTTCTTCA ATCCATACAT CGTCGAAGAT CTCGGTGAGC TGAAAATCGC CATCATCGGC
TTCACCACAG AAGAAACGGA GATCCTGGAA CCCCTCTACC TCGAAGGTCT GAAGTTCGAA
AACGCCCTGA AAGTGGCCCA GAAAATAGCA CCCGAATTGA AAAAACAGGC AGATGTTGTG
ATCGCTCTTG CGCACCTTGA CTGGGGAGAG CCGAAGAAGG AAGACATCAC CACGACACAC
CAGCTGGCAG GAGTTGAGGG AATAGACGTT GTGATAGCAG GGCACAGCCA CGTGCTTGGA
TCTGACGTTG TGGACGGAAA GATAATAGCT TCGGCCGGAG AATATGGAAA GTACGTTGGA
AGACTCGATC TGGACATCGA AGACGGAAAG ATCGTGGCGT GGCACTGGGA AGCGATACCC
GTTAATTTGA AGGTGTACGA AAACGAAAAG TACAGGTACC TCGGGAAGCC GTACCTCGAA
AACAGATACG TCGCAAAGGC TCTTGAATAC TTCAAGAAAG TGGGAAATGA AAAACTCGAT
ACCGTCATAG GAGAGACGAA GATCTACCTC GATGGTGAAA GAGAACACGT CAGATCGAAA
AGCACGAATC TTGCCAACCT CATAGTGGAC GCCATGAGAT GGAAAGTGGG GGCGGATATC
GCTTTCACAA ACGGTGGAGG TATCAGAGCC TCTATAAAAC CTGGAAAGAT CACTGTGAGA
GATATACTGA CGGTTCTTCC GTTTGGAAAC ACTCTCTACG TACTGGAACT CACCGGTGAA
CAGATCATGA AAGTGCTCGA GTACGCCGCT ACCATTCCGG AAGGTAAAGG TGCGTTCCTC
CAGGTTTCCG GCCTCACTTG GAAGAGCAAA GACGGAAAAG TCGTAGAGGT TCTCGTGAAC
GGAGAGCCGC TCGATCCAGA GAAAAAGTAC AAAGTGGTCA CAAACAACTA CATGGCAGGT
GGTGGAGACG GTTATGTCAT GTTCAAAGAG TGGGACGGAT ACGACACGGG ATACCTCATG
TCAGACGCCG TCATTGAGTA CATCCAGAAT GTTCTGAACG GGAAAATAGA AGAGTACGAC
GATTCGCAGA GGTACGTGAG AGAGTAA
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| Protein sequence | MRKFLVILLA LLITALLLGA RLTILHVNDT HGHAWAFDEY RNPGIGGLAA IATIVEEVKR
EVESQGGYVI FLHAGDLNTG VPESDLQDAI PDIVGFNMIG LKAMAVGNHE FDNPREVLEK
QMKFADFPFL SANIVKEDGE PFFNPYIVED LGELKIAIIG FTTEETEILE PLYLEGLKFE
NALKVAQKIA PELKKQADVV IALAHLDWGE PKKEDITTTH QLAGVEGIDV VIAGHSHVLG
SDVVDGKIIA SAGEYGKYVG RLDLDIEDGK IVAWHWEAIP VNLKVYENEK YRYLGKPYLE
NRYVAKALEY FKKVGNEKLD TVIGETKIYL DGEREHVRSK STNLANLIVD AMRWKVGADI
AFTNGGGIRA SIKPGKITVR DILTVLPFGN TLYVLELTGE QIMKVLEYAA TIPEGKGAFL
QVSGLTWKSK DGKVVEVLVN GEPLDPEKKY KVVTNNYMAG GGDGYVMFKE WDGYDTGYLM
SDAVIEYIQN VLNGKIEEYD DSQRYVRE
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