| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpet_0898 |
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| Symbol | |
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| ID | 5171160 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermotoga petrophila RKU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009486 |
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| Strand | + |
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| Start bp | 917576 |
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| End bp | 919744 |
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| Gene Length | 2169 bp |
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| Protein Length | 722 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640563416 |
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| Product | glycoside hydrolase family 3 protein |
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| Protein accession | YP_001244492 |
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| Protein GI | 148270032 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1472] Beta-glucosidase-related glycosidases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 42 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATGGGAA AGATCGATGA AATCCTTTCA CAGCTGACTA TTGAAGAAAA AGTGAAACTT
GTAGTGGGGG TTGGTCTTCC AGGACTTTTT GGAAATCCAC ATTCCAGAGT GGCAGGTGCA
GCTGGAGAAA CGCATCCTGT TCCGAGGCTT GGAATTCCTT CTTTCGTTCT GGCCGACGGT
CCCGCGGGCC TCAGAATAAA TCCCACAAGA GAGAACGACG AAAACACCTA TTACACAACA
GCGTTTCCTG TTGAAATCAT GCTCGCTTCC ACCTGGAACA AAGATCTTCT GGAAGAAGTA
GGAAAAGCTA TGGGAGAAGA AGTCAGGGAA TACGGTGTCG ATGTGCTTCT TGCACCTGCG
ATGAACATTC ACAGGAACCC TCTTTGTGGA AGGAATTTCG AGTATTATTC AGAAGATCCT
GTCCTTTCCG GTGAAATGGC TTCAGCCTTT GTCAAGGGAG TTCAATCTCA AGGGGTGGGA
GCCTGCATAA AACACTTTGT CGCGAACAAC CAGGAAACGA ACAGGATGGT AGTGGACACG
ATCGTGTCCG AGCGAGCCCT CAGAGAAATA TATCTGAAAG GTTTTGAAAT TGCCGTCAAG
AAAGCAAGAC CCTGGACCGT GATGAGCGCT TACAACAAAC TGAATGGAAA ATACTGTTCA
CAGAACGAAT GGCTTTTGAA GAAGGTTCTC AGGGAAGAAT GGGGATTTGA CGGTTTCGTG
ATGAGCGACT GGTACGCGGG AGACAACCCT GTAGAACAGC TCAAGGCCGG AAACGATATG
ATCATGCCTG GAAAAGCGTA TCAGGTGAAC ACGGAAAGAA GAGATGAAAT AGAAGAAATC
ATGGAGGCGT TGAAGGAGGG AAGACTCAGT GAGGAAGTCC TGAACGAATG TGTGAGAAAC
ATCCTCAAAG TTCTTGTGAA CGCGCCTTCC TTTAAAGGGT ACAGGTACTC GAACAAACCG
GACCTCGAAT CTCACGCGAA AGTTGCCTAC GAAGCAGGTG TGGAGGGTGT TGTCCTTCTT
GAGAACAACG GTGTTCTTCC ATTCGATGAA AGTATCCATG TCGCCGTCTT TGGCACCGGT
CAAATCGAAA CAATAAAGGG AGGAACGGGA AGTGGAGACA CCCATCCGAG ATACACGATC
TCTATCCTTG AAGGCATAAA AGAAAGAAAC ATGAAGTTCG ACGAAGAACT CACCTCCATC
TATGAGGATT ACATCAAAAA GATGAGAGAA ACAGAGGAAT ATAAACCCAG AACTGACTCC
TGGGGAACGG TTATAAAACC GAAACTTCCA GAGAACTTTC TCTCAGAAAA AGAGATAAAG
AAGGCTGCGA AGAAAAACGA TGCTGCAGTT GTTGTAATCA GTAGGATCTC CGGTGAGGGA
TACGACAGAA AGCCGGTGAA AGGTGACTTC TACCTCTCCG ATGACGAGCT GGAGCTCATA
AAAACAGTCT CAAGGGAATT CCACGAACAG GGTAAGAAGG TTGTGGTTCT TCTCAACATC
GGAAGTCCCA TTGAAGTTGC AAGCTGGAGA GATCTTGTGG ATGGAATCCT TCTCGTCTGG
CAAGCAGGAC AGGAGATGGG AAGAATAGTG GCCGATGTTC TTGTGGGAAG GGTAAACCCC
TCCGGAAAAC TTCCAACGAC CTTCCCGAAG GATTACTCGG ACGTTCCATC CTGGACGTTC
CCAGGAGAGC CAAAGGACAA TCCGCAAAGA GTGGTGTACG AGGAAGACAT CTACGTGGGA
TACAGGTACT ACGACACCTT TGGTGTGGAA CCTGCCTACG AGTTCGGCTA CGGCCTCTCT
TACACAAAGT TTGAATACAA AGATTTAAAG ATCGCTATCG ACGGAGATAT ACTCAGAGTG
TCGTACACGA TCACAAACAC CGGGGACAGA GCTGGAAAGG AAGTCTCACA GGTTTATGTC
AAAGCTCCAA AAGGGAAAAT AGACAAACCC TTCCAGGAGC TGAAAGCGTT CCACAAAACA
AAACTTTTGA ACCCGGGTGA ATCCGAAAAG ATCTTTCTGG AAATTCCTCT TAGAGATCTT
GCGAGTTTCG ATGGGAAAGA ATGGGTTGTC GAGTCAGGAG AATACGAGGT CAGGGTCGGT
GCATCTTCGA GGGATATAAG GTTGAGAGAT ATTTTTCTGG TTGAGGGAGA GAAGAGATTC
AAACCATGA
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| Protein sequence | MMGKIDEILS QLTIEEKVKL VVGVGLPGLF GNPHSRVAGA AGETHPVPRL GIPSFVLADG
PAGLRINPTR ENDENTYYTT AFPVEIMLAS TWNKDLLEEV GKAMGEEVRE YGVDVLLAPA
MNIHRNPLCG RNFEYYSEDP VLSGEMASAF VKGVQSQGVG ACIKHFVANN QETNRMVVDT
IVSERALREI YLKGFEIAVK KARPWTVMSA YNKLNGKYCS QNEWLLKKVL REEWGFDGFV
MSDWYAGDNP VEQLKAGNDM IMPGKAYQVN TERRDEIEEI MEALKEGRLS EEVLNECVRN
ILKVLVNAPS FKGYRYSNKP DLESHAKVAY EAGVEGVVLL ENNGVLPFDE SIHVAVFGTG
QIETIKGGTG SGDTHPRYTI SILEGIKERN MKFDEELTSI YEDYIKKMRE TEEYKPRTDS
WGTVIKPKLP ENFLSEKEIK KAAKKNDAAV VVISRISGEG YDRKPVKGDF YLSDDELELI
KTVSREFHEQ GKKVVVLLNI GSPIEVASWR DLVDGILLVW QAGQEMGRIV ADVLVGRVNP
SGKLPTTFPK DYSDVPSWTF PGEPKDNPQR VVYEEDIYVG YRYYDTFGVE PAYEFGYGLS
YTKFEYKDLK IAIDGDILRV SYTITNTGDR AGKEVSQVYV KAPKGKIDKP FQELKAFHKT
KLLNPGESEK IFLEIPLRDL ASFDGKEWVV ESGEYEVRVG ASSRDIRLRD IFLVEGEKRF
KP
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