Gene Tpet_0895 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpet_0895 
Symbol 
ID5171254 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermotoga petrophila RKU-1 
KingdomBacteria 
Replicon accessionNC_009486 
Strand+ 
Start bp915594 
End bp916586 
Gene Length993 bp 
Protein Length330 aa 
Translation table11 
GC content44% 
IMG OID640563413 
Productoligopeptide/dipeptide ABC transporter, ATPase subunit 
Protein accessionYP_001244489 
Protein GI148270029 
COG category[E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG0444] ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component 
TIGRFAM ID[TIGR01727] oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAGAAA TACTTTTGAA AGCAGAAAAT GTGAGGGCCT ACTATAAACT GGAAAAGGTT 
TCTGTCAAAG CTGTGGATGG TTTGTCTTTT GAAATACTGG AAGACGAAGT TATAGGGGTT 
GTCGGTGAAT CTGGTTGTGG AAAGACAACT CTCTCGAACG TGATTTTCAT GAACATGGTA 
AAACCTCTGA CACTCGTTGA TGGAAAGATT TTTCTGAGAG TTAACGGAGA GTTTGTAGAA 
ATCTCGTCCA TGACAAGAGA CGAAGTGAAA AGAAAATTCT GGGGAAAGGA GATAACGATA 
ATACCCCAGG CGGCGATGAA TGCACTGATG CCAACCATCA GAATGGAAAA ATACGTGAGA 
CACCTTGCAG AATCACACAG AATAGACGAA GAAGAGCTTT TGGAGAAAGC CAGAAGGAGA 
TTCGAAGAGG TAGGACTCGA TCCACTCTGG ATTAAAAGAT ATCCTTTTGA GCTCAGTGGT 
GGAATGAGAC AAAGAGCCGT GATAGCGATC GCAACTATAT TGAATCCGAG CCTTCTCATA 
GCTGACGAGC CAACTTCCGC TCTGGATGTT GTGAATCAAA AGGTTCTTTT GAAAGTCCTG 
ATGCAGATGA AACGCCAAGG AATCGTGAAG AGCATAATCT TCATCACCCA TGACATAGCG 
ACTGTAAGGC AGATCGCAGA CAGAATGATT ATCATGTACG CTGGAAAGAT AGTTGAGTTC 
GCACCTGTGG AAAGTCTCCT GGAAAAACCG CTTCATCCTT ACACCCAGGG GCTTTTCAAT 
TCGGTTCTCA CTCCAGAACC AGAGGTGAAA AAGAGAGGAA TCACCTCCAT TCCTGGTGCT 
CCACCCAATC TCATAAATCC TCCATCTGGC TGCAGATTCC ATCCCAGATG CCCTCACGCG 
ATGGATGTCT GTAAAGAAAA AGAACCACCA CTAACGGAAA TAGAACCGGG AAGAAGAGTT 
GCATGCTGGC TTTACATGGA GGAGAGAGCA TGA
 
Protein sequence
MKEILLKAEN VRAYYKLEKV SVKAVDGLSF EILEDEVIGV VGESGCGKTT LSNVIFMNMV 
KPLTLVDGKI FLRVNGEFVE ISSMTRDEVK RKFWGKEITI IPQAAMNALM PTIRMEKYVR 
HLAESHRIDE EELLEKARRR FEEVGLDPLW IKRYPFELSG GMRQRAVIAI ATILNPSLLI 
ADEPTSALDV VNQKVLLKVL MQMKRQGIVK SIIFITHDIA TVRQIADRMI IMYAGKIVEF 
APVESLLEKP LHPYTQGLFN SVLTPEPEVK KRGITSIPGA PPNLINPPSG CRFHPRCPHA 
MDVCKEKEPP LTEIEPGRRV ACWLYMEERA