Gene Tpet_0885 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpet_0885 
Symbol 
ID5170566 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermotoga petrophila RKU-1 
KingdomBacteria 
Replicon accessionNC_009486 
Strand
Start bp904285 
End bp904647 
Gene Length363 bp 
Protein Length120 aa 
Translation table11 
GC content47% 
IMG OID640563403 
Productputative 6-pyruvoyl tetrahydropterin synthase 
Protein accessionYP_001244479 
Protein GI148270019 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0720] 6-pyruvoyl-tetrahydropterin synthase 
TIGRFAM ID[TIGR00039] 6-pyruvoyl tetrahydropterin synthase/QueD family protein
[TIGR03367] queuosine biosynthesis protein QueD 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.0677364 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATCCTGG TGAAGAAATT TTCTTTCGAG GCCGCACACA ACCTGACTAA ATACCACGGA 
AAATGTGAAA AGCTCCACGG TCACACCTAC AGACTCGTTG TTAAGATAGA AGGTCCTCTG
AACGAAGAAG AGATGGTCAT GGATTTTGCC GAGCTGAAAA AAATCGTCGA AGAGCTGGTT
ATTTCTAAAC TCGATCACTC GTATCTCAAC GACATGTTCG ACCAGCCCAC CACGGAAAGA
GTAGCGATAT GGATATGGGA TCAGCTCTCA AAAGAGATGG AAAAACGCGG TGTCAGGCTC
CACGAGATAG AACTGTGGGA GACAGAAACG AGCGGTGTTG TGTACAGGGG TGAGAAGGTT
TGA
 
Protein sequence
MILVKKFSFE AAHNLTKYHG KCEKLHGHTY RLVVKIEGPL NEEEMVMDFA ELKKIVEELV 
ISKLDHSYLN DMFDQPTTER VAIWIWDQLS KEMEKRGVRL HEIELWETET SGVVYRGEKV