Gene Tpet_0883 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpet_0883 
Symbol 
ID5170572 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermotoga petrophila RKU-1 
KingdomBacteria 
Replicon accessionNC_009486 
Strand
Start bp902669 
End bp903505 
Gene Length837 bp 
Protein Length278 aa 
Translation table11 
GC content46% 
IMG OID640563401 
Productdihydropteroate synthase 
Protein accessionYP_001244477 
Protein GI148270017 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0294] Dihydropteroate synthase and related enzymes 
TIGRFAM ID[TIGR01496] dihydropteroate synthase 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0252047 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGTTTACA CAACTCCATG GAACAGAAAG ATCGAGTTTG GAAGAACGAT GGTTATGGGA 
ATAATAAACG TCACACCGGA CTCCTTCTTC GCTGATTCCA GAAAACAGAG CGTACTCGAA
GCGGTGGAAA CCGCAAAGAA GATGATAGAA GAAGGTGTTG ACATAATAGA CGTGGGGGGA
ATGTCCACCC GCCCCGGATC AGATCCCGTC GACGAGGAAG AAGAATTGAA CAGAGTGATT
CCCGTGATAA GAGCGATCAG ATCGATAACC GACGTTCCGA TTTCCGTAGA TACGTACAGG
TGGAGAGTGG CTTTGAAAGC TCTCGAAGCC GGAGCGGACG TTGTAAACGA TATCAGCGGG
TATCAATTCG AACCGGATAT CGTCAAAGTA GTTTCTGAAA ACAACTCCCC TTACGTTCTC
ATGCACATAA AGGGAACACC GAAGACGATG CAGGAAAATC CTCATTACGA GGATGTGGTG
AAGGAGATAA AAGAGTACTT CTCAGAAAAA ATAGAGCATT TAAAAGAAAA AGGTGTGAAC
CAGATCGTTC TGGACCCGGG TATCGGGTTT GGAAAAAGAT ACGAAGACAA CCTCGAAATT
CTTCGAAGGA TCGACGAGTT CAAAGAGTTC AAACTGCCCA TCCTCATAGG TGCTTCAAGA
AAATCTTTCA TAGGAATCAC CTTGGGAAAC GTGCCCCCCG AAGAAAGACT TGAAGGTACT
CTTGCGGTCA CCGCGTACTG CACGATGAAA GGAGTAGATA TAATTCGGGT ACACGATGTC
CTCCCTAACA AGAGGGTGAT AAGAATGATG GAGGCGATAC TCTGGCAAAG GTTGTAA
 
Protein sequence
MVYTTPWNRK IEFGRTMVMG IINVTPDSFF ADSRKQSVLE AVETAKKMIE EGVDIIDVGG 
MSTRPGSDPV DEEEELNRVI PVIRAIRSIT DVPISVDTYR WRVALKALEA GADVVNDISG
YQFEPDIVKV VSENNSPYVL MHIKGTPKTM QENPHYEDVV KEIKEYFSEK IEHLKEKGVN
QIVLDPGIGF GKRYEDNLEI LRRIDEFKEF KLPILIGASR KSFIGITLGN VPPEERLEGT
LAVTAYCTMK GVDIIRVHDV LPNKRVIRMM EAILWQRL