Gene Tpet_0879 details

Gene Information

• Locus tag: Tpet_0879
• ID: 5170313
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Thermotoga petrophila RKU-1
• Kingdom: Bacteria
• Replicon accession: NC_009486
• Strand: -
• Start bp: 898772
• End bp: 899320
• Gene Length: 549 bp
• Protein Length: 182 aa
• Translation table: 11
• GC content: 45%
• IMG OID: 640563397
• Product: hypothetical protein
• Protein accession: YP_001244473
• Protein GI: 148270013

Plasmid Coverage information

• Num covering plasmid clones: 1
• Plasmid unclonability p-value: 0.00000000318164
• Plasmid hitchhiking: No
• Plasmid clonability: decreased coverage

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAAAAGT TTCTTGTGAT TCTTCTCGCG GTAGTGGCAG TGGGAGCTTT CGCTTTCTCG 
CTGGAGGATC TGAAGGTCAG CGTTTTTGGG AATTATAATT TTGTTGTTTC TGCGACATCT 
ACAACTTCCG ATGCTACGGC AGCTAATTAC TTGGATTTTG GTCTCGATCT CACATATCCG 
GTAGCAGAAA ATATGGAGCT GGGTCTTGGG CTTGGTTTTG CTTATCTTCT TGGTACTGAT 
GCTACTCCTC TTTTCTCTGT TGATGCTACT CCGAGTCAGA ACGCACTCGA TCTGTTTGCT 
GTTTTCAAAT ACTCCATTGA ACTCGACAGA GAATCCAGAG TTGTCATAAG GGGATTCGGT 
GGACCCAGCT GGCCTATGGC CAAGTTCGAT TTTGGTAAAT TCGGTTGGGT CTTTGGTGTT 
GGTGCCAGCT ACACAAGAGA CTTTGAAGGA CTCGTAGTTG GACTCGGTGC AGGTGTTGAA 
ATGAGAATCT ACGAGAAAAA CAACGTGATC GCAATCCCCG TTGGAGGAAA CTTTGAGATC 
AACTTCTGA 

 

Protein sequence

MKKFLVILLA VVAVGAFAFS LEDLKVSVFG NYNFVVSATS TTSDATAANY LDFGLDLTYP 
VAENMELGLG LGFAYLLGTD ATPLFSVDAT PSQNALDLFA VFKYSIELDR ESRVVIRGFG 
GPSWPMAKFD FGKFGWVFGV GASYTRDFEG LVVGLGAGVE MRIYEKNNVI AIPVGGNFEI 
NF