Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tpet_0879 |
Symbol | |
ID | 5170313 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermotoga petrophila RKU-1 |
Kingdom | Bacteria |
Replicon accession | NC_009486 |
Strand | - |
Start bp | 898772 |
End bp | 899320 |
Gene Length | 549 bp |
Protein Length | 182 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 640563397 |
Product | hypothetical protein |
Protein accession | YP_001244473 |
Protein GI | 148270013 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.00000000318164 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAAGT TTCTTGTGAT TCTTCTCGCG GTAGTGGCAG TGGGAGCTTT CGCTTTCTCG CTGGAGGATC TGAAGGTCAG CGTTTTTGGG AATTATAATT TTGTTGTTTC TGCGACATCT ACAACTTCCG ATGCTACGGC AGCTAATTAC TTGGATTTTG GTCTCGATCT CACATATCCG GTAGCAGAAA ATATGGAGCT GGGTCTTGGG CTTGGTTTTG CTTATCTTCT TGGTACTGAT GCTACTCCTC TTTTCTCTGT TGATGCTACT CCGAGTCAGA ACGCACTCGA TCTGTTTGCT GTTTTCAAAT ACTCCATTGA ACTCGACAGA GAATCCAGAG TTGTCATAAG GGGATTCGGT GGACCCAGCT GGCCTATGGC CAAGTTCGAT TTTGGTAAAT TCGGTTGGGT CTTTGGTGTT GGTGCCAGCT ACACAAGAGA CTTTGAAGGA CTCGTAGTTG GACTCGGTGC AGGTGTTGAA ATGAGAATCT ACGAGAAAAA CAACGTGATC GCAATCCCCG TTGGAGGAAA CTTTGAGATC AACTTCTGA
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Protein sequence | MKKFLVILLA VVAVGAFAFS LEDLKVSVFG NYNFVVSATS TTSDATAANY LDFGLDLTYP VAENMELGLG LGFAYLLGTD ATPLFSVDAT PSQNALDLFA VFKYSIELDR ESRVVIRGFG GPSWPMAKFD FGKFGWVFGV GASYTRDFEG LVVGLGAGVE MRIYEKNNVI AIPVGGNFEI NF
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