Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tpet_0877 |
Symbol | |
ID | 5170046 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermotoga petrophila RKU-1 |
Kingdom | Bacteria |
Replicon accession | NC_009486 |
Strand | + |
Start bp | 897141 |
End bp | 898358 |
Gene Length | 1218 bp |
Protein Length | 405 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 640563395 |
Product | IS605 family transposase OrfB |
Protein accession | YP_001244471 |
Protein GI | 148270011 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0675] Transposase and inactivated derivatives |
TIGRFAM ID | [TIGR01766] transposase, IS605 OrfB family, central region |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.0000000395057 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGTCAAGAT ATGTGATCAG AACCTACAAA GTCCCTGTGC CGGTGGAATT GTATCCTTTG TGTTCCGAGC TGAACAGGAT CGCCGCTCGG ATCTACAACA AAACCATGTC GCTGGTCAAA AAGATCAAAA ACAAGAAAGG TTTTTGGCTC TCACCGAACA CAGCGCAAAA ATACATCCTT CGCTGGTCGA GCGCTATCGA TATCCACACT CACTCCAAAC AAGCCATGGT CCAGCTGTAC TTTCAGGCAC TCAATAGCTA CTTTGTTGCA GTCAAAACAA ATCCACATGC AAAACCGCCA TACAAGAGGA AAAATTTTCT GCCGTTCATT TGGAAAAATC AAGCCATCAA GCTTTTGCCA GATGGGAAGG TCAAGCTCTC GATGGGACGC AATCGAGAGC CATTTGTAAT CCCCACAACG TTGCCAGCCG GTACAACAAT CAGGCAAGCC AAGTTGGTTT ACGAAGCCGG CCGGTATTAT CTTCACCTTG CGATAGAGGT GAAGAGTGAG CACAAGAGAG GCCAAAGCCA GAAAGTTATG TCCGTAGACG TCGGAATACT CCGCCCGATA ACCTGTTTCG ATGGTTCTGA GGTGATTTCA TATCACGGTG GTGTTCTCAA CAGCATACTC AGATACCGAA ACAAAAGACT AGCAGATATT CAGCGGGCTT TGAGTCGATG CCAAAAGGGC TCACGAAGGT ATAAAAAACT GTCGAGAGCC AAAAGAAGGG TGCTGTACAA GACGAGAAAC CAAATCAACG ACGTGCTCCA CAAAATCACG AGCTACTTCA TCGGTTTATG CGTGCAAAAG AACATAGGCA CCATTGTCGT CGGAGACATT ACGAACATAA GAGAACGCAC AAACGGCAAC GATAATTTCA ATCAAAAACT GCACCAATGG GCCTTCAGAA AGCTCATGAG CCAGATAGAA TACAAAGCGC AAATATTCGG CATCGAGGTT GTGCGCATTT CTGAAGCGCA TACAAGCAAA ACGTGTCCTG TATGCGGCAC TCAAAACAGG CCGTCTGGAC GAAATTACAA GTGCGCCGGC TGCGGTTTTG AGTATCACAG GGACGGAGTG GGAGCAATCA ACATTTGGAA AAGGTATCTT GGGACGAAGT CCCAAGTAGT AGCGGGCTTG GCACCCGCCA GAGGTGTGAG GTTTAACCCG CACCTCTGTG GCCATGGAGC GATTAGCGCT CCATGGAAGG CAGCCTAA
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Protein sequence | MSRYVIRTYK VPVPVELYPL CSELNRIAAR IYNKTMSLVK KIKNKKGFWL SPNTAQKYIL RWSSAIDIHT HSKQAMVQLY FQALNSYFVA VKTNPHAKPP YKRKNFLPFI WKNQAIKLLP DGKVKLSMGR NREPFVIPTT LPAGTTIRQA KLVYEAGRYY LHLAIEVKSE HKRGQSQKVM SVDVGILRPI TCFDGSEVIS YHGGVLNSIL RYRNKRLADI QRALSRCQKG SRRYKKLSRA KRRVLYKTRN QINDVLHKIT SYFIGLCVQK NIGTIVVGDI TNIRERTNGN DNFNQKLHQW AFRKLMSQIE YKAQIFGIEV VRISEAHTSK TCPVCGTQNR PSGRNYKCAG CGFEYHRDGV GAINIWKRYL GTKSQVVAGL APARGVRFNP HLCGHGAISA PWKAA
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