Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tpet_0867 |
Symbol | |
ID | 5170818 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermotoga petrophila RKU-1 |
Kingdom | Bacteria |
Replicon accession | NC_009486 |
Strand | + |
Start bp | 886433 |
End bp | 887449 |
Gene Length | 1017 bp |
Protein Length | 338 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 640563386 |
Product | oligopeptide/dipeptide ABC transporter, ATPase subunit |
Protein accession | YP_001244462 |
Protein GI | 148270002 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG4608] ABC-type oligopeptide transport system, ATPase component |
TIGRFAM ID | [TIGR01727] oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAATTAT TAGAAGTGAA AGGACTGAAG AAGTACTTCC CGCTGACAAA GGGTTTTTTC AAGAAAGTGG TAGGTTACGT CAGAGCAGTG GACGATGTCA GTTTCGATAT AAAACAGGGT GAAACTCTTG CACTGGTGGG AGAGAGTGGC TGTGGAAAAA CAACCACCGC CAAAAGCATA CTCAGAGCGA TAGATCCCAC AGATGGAGAT GTTATTCTTC ATCTGGATGG AAAAGACGTG AACATAGCGA AGCTCCCCAG AGATGAGCTG AAACCCTACA GAAGGTATAT GCAGATGATC TTTCAGAATC CTTATACCTC TCTCAATCCA AGAATGAAGG TCAAGGAGAT CGTTGGTGAA CCGCTTTTGG TGAATGGTAT AGCGAAAGGA AAAGAACTGG AAGATCGAGT GGCAGAGCTT TTGAAGGCGG TTGGATTGAG ACCGGAGTAT ATGATAAGGT ATCCGCACGC TTTCTCTGGC GGACAGAGAC AGAGAATCGT TATAGCAAGA GCAATCGCTC TGAGGCCAAA ACTGGTGGTG TGTGATGAAC CGACATCTGC GCTGGATGTT TCTATAAGGG CACAGATACT GAACCTTCTG ATGGATCTTC AGGAAGAGTT TTCTCTCACC TATCTCTTTA TCACACACGA CCTGAGCGTT GTGGAACACA TATCTGATAG AGTTGCGGTG ATGTACTTAG GAAAGATCGT GGAGCTTGCC AGCACCGAAG AGATATTCGA AAATCCAAAG CATCCATACA CGGAGACGCT TTTGAGGTCC GTTCCAAAGC CTGATCCGGA TTTGAGGGAA GAACTCGTTC CAATAGAAGG GGAGGTTCCA AATCCGGCGA ATCCTCCATC AGGATGTTAC TTCCATCCAA GATGCCCTTA TACAAAAAGT ATCTGTAAGG AAGAGTATCC CGAGTTCAGA AATCTTGGAA CGGAAGACAA ACCACATTAC GTGGCCTGTC ATTTCGCCGA AAGTTTGAAA TTGAGAGGCG TGAAAATCAC TTTGTGA
|
Protein sequence | MKLLEVKGLK KYFPLTKGFF KKVVGYVRAV DDVSFDIKQG ETLALVGESG CGKTTTAKSI LRAIDPTDGD VILHLDGKDV NIAKLPRDEL KPYRRYMQMI FQNPYTSLNP RMKVKEIVGE PLLVNGIAKG KELEDRVAEL LKAVGLRPEY MIRYPHAFSG GQRQRIVIAR AIALRPKLVV CDEPTSALDV SIRAQILNLL MDLQEEFSLT YLFITHDLSV VEHISDRVAV MYLGKIVELA STEEIFENPK HPYTETLLRS VPKPDPDLRE ELVPIEGEVP NPANPPSGCY FHPRCPYTKS ICKEEYPEFR NLGTEDKPHY VACHFAESLK LRGVKITL
|
| |