Gene Tpet_0867 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpet_0867 
Symbol 
ID5170818 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermotoga petrophila RKU-1 
KingdomBacteria 
Replicon accessionNC_009486 
Strand
Start bp886433 
End bp887449 
Gene Length1017 bp 
Protein Length338 aa 
Translation table11 
GC content45% 
IMG OID640563386 
Productoligopeptide/dipeptide ABC transporter, ATPase subunit 
Protein accessionYP_001244462 
Protein GI148270002 
COG category[E] Amino acid transport and metabolism 
COG ID[COG4608] ABC-type oligopeptide transport system, ATPase component 
TIGRFAM ID[TIGR01727] oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAATTAT TAGAAGTGAA AGGACTGAAG AAGTACTTCC CGCTGACAAA GGGTTTTTTC 
AAGAAAGTGG TAGGTTACGT CAGAGCAGTG GACGATGTCA GTTTCGATAT AAAACAGGGT
GAAACTCTTG CACTGGTGGG AGAGAGTGGC TGTGGAAAAA CAACCACCGC CAAAAGCATA
CTCAGAGCGA TAGATCCCAC AGATGGAGAT GTTATTCTTC ATCTGGATGG AAAAGACGTG
AACATAGCGA AGCTCCCCAG AGATGAGCTG AAACCCTACA GAAGGTATAT GCAGATGATC
TTTCAGAATC CTTATACCTC TCTCAATCCA AGAATGAAGG TCAAGGAGAT CGTTGGTGAA
CCGCTTTTGG TGAATGGTAT AGCGAAAGGA AAAGAACTGG AAGATCGAGT GGCAGAGCTT
TTGAAGGCGG TTGGATTGAG ACCGGAGTAT ATGATAAGGT ATCCGCACGC TTTCTCTGGC
GGACAGAGAC AGAGAATCGT TATAGCAAGA GCAATCGCTC TGAGGCCAAA ACTGGTGGTG
TGTGATGAAC CGACATCTGC GCTGGATGTT TCTATAAGGG CACAGATACT GAACCTTCTG
ATGGATCTTC AGGAAGAGTT TTCTCTCACC TATCTCTTTA TCACACACGA CCTGAGCGTT
GTGGAACACA TATCTGATAG AGTTGCGGTG ATGTACTTAG GAAAGATCGT GGAGCTTGCC
AGCACCGAAG AGATATTCGA AAATCCAAAG CATCCATACA CGGAGACGCT TTTGAGGTCC
GTTCCAAAGC CTGATCCGGA TTTGAGGGAA GAACTCGTTC CAATAGAAGG GGAGGTTCCA
AATCCGGCGA ATCCTCCATC AGGATGTTAC TTCCATCCAA GATGCCCTTA TACAAAAAGT
ATCTGTAAGG AAGAGTATCC CGAGTTCAGA AATCTTGGAA CGGAAGACAA ACCACATTAC
GTGGCCTGTC ATTTCGCCGA AAGTTTGAAA TTGAGAGGCG TGAAAATCAC TTTGTGA
 
Protein sequence
MKLLEVKGLK KYFPLTKGFF KKVVGYVRAV DDVSFDIKQG ETLALVGESG CGKTTTAKSI 
LRAIDPTDGD VILHLDGKDV NIAKLPRDEL KPYRRYMQMI FQNPYTSLNP RMKVKEIVGE
PLLVNGIAKG KELEDRVAEL LKAVGLRPEY MIRYPHAFSG GQRQRIVIAR AIALRPKLVV
CDEPTSALDV SIRAQILNLL MDLQEEFSLT YLFITHDLSV VEHISDRVAV MYLGKIVELA
STEEIFENPK HPYTETLLRS VPKPDPDLRE ELVPIEGEVP NPANPPSGCY FHPRCPYTKS
ICKEEYPEFR NLGTEDKPHY VACHFAESLK LRGVKITL