Gene Tpet_0859 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpet_0859 
Symbol 
ID5171149 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermotoga petrophila RKU-1 
KingdomBacteria 
Replicon accessionNC_009486 
Strand
Start bp876533 
End bp877273 
Gene Length741 bp 
Protein Length246 aa 
Translation table11 
GC content41% 
IMG OID640563378 
Producttranscriptional regulator IclR-like protein 
Protein accessionYP_001244454 
Protein GI148269994 
COG category[K] Transcription 
COG ID[COG1414] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones52 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAATACCC TCAAAAAAGC CTTTGAAATA CTGGATTTCA TCGTAAAGAA TCCTGGCGAT 
GTAAGTGTTT CTGAAATAGC CGAAAAGTTC AATATGAGCG TTTCAAACGC ATACAAATAC
ATGATCGTTC TCGAAGAGAA AGGGTTTGTT CTCAGAAAAA AAGACAAGAG ATACGTACCG
GGGTACAAAT TGATAGAGTA CGGTTCATTC GTTCTGAGGC GCTTCAACAT TAGGGATATA
GCTCACGACC ATCTCGTGGA TATCATGAAA AGAACGGGGG AAACAGTACA CCTGATTTTG
AAAGATGGCT TCGAGGGAGT TTACATAGAC AAGGTGGAGG GTGAGCAGAG CATTCCTATG
GTCTCAAGAC TTGGTATGAA AGTCGACCTT TACTCCACAG CCTCTGGTAA ATCCATTCTC
GCCTTCGTTC CCGAAAAAGA ATTGAAGGAA TACCTGAAAA TTGTGGAACT AAAACCAAAA
ACCCCAAACA CCATCACGAA TCCCAGAGTA CTGAAGAGAG AGCTTGAAAA AATTAGAAAG
CGAGGATACG CCGTAGACAA CGAAGAAAAC GAAATAGGTA TCATGTGTGT GGGAGTTCCT
ATATTTGATC ACAACGGATA TCCGGTGGCT GGAGTGAGTA TTTCCGGGGT TGCACGAAAG
TTCACAGAGG AAAAAATAGA AGAATACTCC GATGTACTCA AAGAAAAGGC AGAAGAAATA
TCCAGAAAAC TTGGATATTG A
 
Protein sequence
MNTLKKAFEI LDFIVKNPGD VSVSEIAEKF NMSVSNAYKY MIVLEEKGFV LRKKDKRYVP 
GYKLIEYGSF VLRRFNIRDI AHDHLVDIMK RTGETVHLIL KDGFEGVYID KVEGEQSIPM
VSRLGMKVDL YSTASGKSIL AFVPEKELKE YLKIVELKPK TPNTITNPRV LKRELEKIRK
RGYAVDNEEN EIGIMCVGVP IFDHNGYPVA GVSISGVARK FTEEKIEEYS DVLKEKAEEI
SRKLGY