Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tpet_0854 |
Symbol | |
ID | 5170667 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermotoga petrophila RKU-1 |
Kingdom | Bacteria |
Replicon accession | NC_009486 |
Strand | + |
Start bp | 871060 |
End bp | 872103 |
Gene Length | 1044 bp |
Protein Length | 347 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 640563373 |
Product | endo-1,4-beta-xylanase |
Protein accession | YP_001244449 |
Protein GI | 148269989 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG3693] Beta-1,4-xylanase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAATAT TACCTTCTGT GCTGATCCTT TTGTTGGGAT GTGTTCCGGT TTTCAGCTCT CAAAATGTAT CTCTGAGAGA GCTCGCAGAA AAGCTGAACA TCTATATTGG TTTTGCTGCA ATCAACAACT TTTGGTCTCT TTCCGACGAA GAAAAGTACA TGGAAGTTGC AAGAAGAGAA TTCAACATCC TGACTCCCGA GAACCAGATG AAGTGGGATA CGATCCATCC AGAAAGAGAC AGATACAATT TCACTCCCGC TGAAAAACAC GTTGAGTTTG CAGAAGAAAA CAACATGATC GTGCATGGGC ACACTCTTGT CTGGCACAAC CAGCTTCCTG GATGGATCAC TGGTAGAGAA TGGACAAAGG AAGAACTTTT GAACGTTCTT GAAGACCACA TAAAAACGGT GGTGTCTCAT TTCAAAGGTA GAGTGAAGAT CTGGGATGTG GTGAACGAAG CGGTGAGCGA TTCTGGAACC TACAGGGAAA GCGTGTGGTA CAAGACGATC GGTCCTGAAT ACATTGAAAA AGCGTTCAGA TGGACAAAAG AAGCCGATCC AGATGCGATT CTCATCTACA ACGACTACAG CATAGAAGAA ATCAACGCAA AATCGAACTT CGTCTACAAC ATGATAAAAG AGCTGAAAGA AAAGGGAGTA CCTGTAGATG GAATAGGATT TCAGATGCAC ATAGACTACA GAGGGCTCAA TTATGACAGT TTCAGAAGGA ATTTGGAGAG ATTTGCGAAA CTCGGTCTTC AAATATACAT CACAGAGATG GATGTGAGAA TTCCTCTCAG TGGTTCGGAA GATTATTACT TGAAAAAACA GGCCGAAATT TGTGCGAAGA TCTTCGATAT ATGCTTGGAC AACCCTGCGG TTAAAGCGAT CCAGTTCTGG GGATTCACAG ACAAATACTC CTGGGTTCCC GGCTTTTTCA AAGGGTACGG AAAAGCGTTG CTATTCGACG AGAATTACAA TCCCAAGCCT TGTTATTACG CGATAAAAGA GGTGCTGGAG AAAAAGATAG AAGAAAGAAA ATGA
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Protein sequence | MKILPSVLIL LLGCVPVFSS QNVSLRELAE KLNIYIGFAA INNFWSLSDE EKYMEVARRE FNILTPENQM KWDTIHPERD RYNFTPAEKH VEFAEENNMI VHGHTLVWHN QLPGWITGRE WTKEELLNVL EDHIKTVVSH FKGRVKIWDV VNEAVSDSGT YRESVWYKTI GPEYIEKAFR WTKEADPDAI LIYNDYSIEE INAKSNFVYN MIKELKEKGV PVDGIGFQMH IDYRGLNYDS FRRNLERFAK LGLQIYITEM DVRIPLSGSE DYYLKKQAEI CAKIFDICLD NPAVKAIQFW GFTDKYSWVP GFFKGYGKAL LFDENYNPKP CYYAIKEVLE KKIEERK
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