| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpet_0847 |
|---|
| Symbol | |
|---|
| ID | 5171273 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermotoga petrophila RKU-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009486 |
|---|
| Strand | - |
|---|
| Start bp | 861690 |
|---|
| End bp | 862667 |
|---|
| Gene Length | 978 bp |
|---|
| Protein Length | 325 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 640563366 |
|---|
| Product | Acetyl xylan esterase |
|---|
| Protein accession | YP_001244442 |
|---|
| Protein GI | 148269982 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG3458] Acetyl esterase (deacetylase) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 44 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCCTTTT TCGATTTACC ACTCGAAGAA CTGAAGAAAT ATCGTCCAGA GCGGTACGAA
GAGAAAGACT TCGATGAGTT CTGGGAAGGG ACACTCGCAG AGAACGAAAA GTTCCCCTTA
GACCCCGTCT TCGAGAGGAT GGAGTCTCAC CTCAAAACAG TCGAAGCGTA CGATGTAACT
TTCTCCGGAT ACATGGGACA GAGGATCAAG GGGTGGCTCC TTGTTCCAAA ACTGGAAGAA
GAAAAACTTC CCTGCGTTGT GCAGTACATA GGATACAACG GTGGAAGAGG ATTCCCTCAC
GACTGGCTGT TCTGGCCTTC TATGGGTTAC ATATGTTTCG TCATGGATAC TCGAGGACAG
GGAAGCGGCT GGATGAAAGG AGATACACCG GATTACCCTG AGGATCCCGT TGACCCTCAG
TATCCAGGAT TCATGACAAG AGGAATACTG GATCCCAGAA CTTACTACTA CAGACGAGTC
TTCACGGACG CTGTCAGAGC CGTTGAAGCC GCTGCTTCTT TTCCTCGGGT AGATCACGAA
AGAATCGTGA TAGCTGGAGG CAGTCAGGGT GGCGGAATAG CCCTTGCGGT GAGCGCTCTC
TCAAAGAAAG CAAAGGCTCT TCTGTGCGAT GTGCCGTTTC TGTGTCACTT CAGAAGGGCA
GTGCAGCTTG TGGATACGCA TCCATACGCG GAGATCACGA ACTTTCTAAA GACCCACAGG
GACAAGGAAG AAATCGTGTT CAGGACTCTT TCCTATTTCG ATGGAGTGAA CTTCGCAGTC
AGAGCGAAGA TCCCTGCGCT GTTTTCTGTG GGTCTCATGG ACAACATTTG TCCTCCTTCA
ACGGTTTTTG CTGCCTACAA TCACTACGCT GGGCCGAAGG AAATCAGAAT CTATCCGTAC
AACAACCACG AGGGAGGAGG CTCTTTCCAG GCAATTGAAC AGGTGAAATT CTTGAAGAGA
CTATTTGAGA AAGGCTAG
|
|---|
| Protein sequence | MAFFDLPLEE LKKYRPERYE EKDFDEFWEG TLAENEKFPL DPVFERMESH LKTVEAYDVT
FSGYMGQRIK GWLLVPKLEE EKLPCVVQYI GYNGGRGFPH DWLFWPSMGY ICFVMDTRGQ
GSGWMKGDTP DYPEDPVDPQ YPGFMTRGIL DPRTYYYRRV FTDAVRAVEA AASFPRVDHE
RIVIAGGSQG GGIALAVSAL SKKAKALLCD VPFLCHFRRA VQLVDTHPYA EITNFLKTHR
DKEEIVFRTL SYFDGVNFAV RAKIPALFSV GLMDNICPPS TVFAAYNHYA GPKEIRIYPY
NNHEGGGSFQ AIEQVKFLKR LFEKG
|
|---|
| |