| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpet_0830 |
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| Symbol | |
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| ID | 5171147 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermotoga petrophila RKU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009486 |
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| Strand | + |
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| Start bp | 844038 |
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| End bp | 845237 |
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| Gene Length | 1200 bp |
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| Protein Length | 399 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 640563349 |
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| Product | type II secretion system protein |
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| Protein accession | YP_001244425 |
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| Protein GI | 148269965 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1459] Type II secretory pathway, component PulF |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0000760113 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCTTTTT ACAAATACGT GGCCGTGGAG GGGAGCGGTA AGAAGATAAC GGGGGTCATA
GAGGCAGAGA ACAAGTTGAA GGCGATATCG ATCCTTTCTG AGAGAGGATT GATGGTTGTT
CGTGTGGAGG AGAAAAAAAA TCCAAAGAAA AGTTCGCCGT TCTTTCAGAT TTCAATCAGC
GAAATAGCCA CGTTCTGCCG ACAGCTTTCC ATAATGATTT CGGCCGGTAT AAGGATAAAA
GAAGCGTTGA ACATTCTGGC TCGTCAGACG GTTTTTTCAA AGCGTTTCAG AAAAGTTATA
CTGGAAATCG CTCTCAGCGT TGAAACAGGG GATTCTTTAG CAGAAGCTTT CAGAAAAACA
GGTGTTTTCG ACAGTGTTTT GATCAGTATG TTAGAAGCAG GAGAAGAAGG TGGAGTCCTT
GACAGAACCC TGAAGAGGGC TGCGGACTTT TACGAAAGTA TGAAAAGGCT TCAGGATGAG
GTAAAATCCG CCATGGCTTA TCCTCTCTTT GTTCTCTTCT TTGCAGTGGT AATCGTACTT
GTGATCAGTT TTTACATACT CCCCAACCTC GTCAGGGCTT TTGGAACTTC TATTCCACTC
TCACCCACGA TTCAATCTCT TCTAAAAGCC AACGAATTTT TGAGTGAAAA CTGGCCGTGG
TTCTCGGTGC TTGTGGTGGG TATCATAGCC GGTATTTTCG TTTTGATGAA ATCAAGATAC
GGTGTTTACA TAAAGGAATA TCTATCCTTT ATTTTTCCAC CTGTCAGGAA GCTCAGACAG
AACATGGGGC TCGAACGATT CGCCAGAACA CTGGGAATTC TTGTGGGAAG CGGTGTCAGA
ATAACCGATG CCATAAAGAT GGCCGCTCAG GCTTCCAGTT CACCTTCCAT TATCAGAAAA
ACCGAAGAAA TGGTTCGGAA GATATCCGAA GGGAAAACCC TTCGAGATAC TTTTGCAGAA
AGTGGAGTTT TTCCACAGTT GATTTATGAG ATGATCGGAA CAGGAGAAGA GACTGGAAAA
GTCGACGAAG TGATGGAAAG AGTGGCCGAC TTCTACGAGG ACATAGTGAA AAACAGTGTG
AAGCAGCTTG TTTCTCTGGT AGAGCCTCTA TTGATAGCAG GTGTTGGTGG ATTTGTGGCT
TTCCTCGCGT ATTCGATATA CACCACGGTA TTTCAGCTTC AGAGGAGTAT AGGTGGATGA
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| Protein sequence | MPFYKYVAVE GSGKKITGVI EAENKLKAIS ILSERGLMVV RVEEKKNPKK SSPFFQISIS
EIATFCRQLS IMISAGIRIK EALNILARQT VFSKRFRKVI LEIALSVETG DSLAEAFRKT
GVFDSVLISM LEAGEEGGVL DRTLKRAADF YESMKRLQDE VKSAMAYPLF VLFFAVVIVL
VISFYILPNL VRAFGTSIPL SPTIQSLLKA NEFLSENWPW FSVLVVGIIA GIFVLMKSRY
GVYIKEYLSF IFPPVRKLRQ NMGLERFART LGILVGSGVR ITDAIKMAAQ ASSSPSIIRK
TEEMVRKISE GKTLRDTFAE SGVFPQLIYE MIGTGEETGK VDEVMERVAD FYEDIVKNSV
KQLVSLVEPL LIAGVGGFVA FLAYSIYTTV FQLQRSIGG
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