Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tpet_0820 |
Symbol | |
ID | 5170511 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermotoga petrophila RKU-1 |
Kingdom | Bacteria |
Replicon accession | NC_009486 |
Strand | - |
Start bp | 832369 |
End bp | 833403 |
Gene Length | 1035 bp |
Protein Length | 344 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 640563339 |
Product | inner-membrane translocator |
Protein accession | YP_001244415 |
Protein GI | 148269955 |
COG category | [R] General function prediction only |
COG ID | [COG4603] ABC-type uncharacterized transport system, permease component |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAACAACA GGGTGTGGTC ATTTCTTGTC CCGTTCTTTT CGGTCATCAT AGCACTTCTT ATAGCAGCCG TGGTGATCAT TCTGATCGGG CAGAACCCCG TGATAGCGTA CAAAGCCATG ATCGAAGGGG CTTTCGGAAA TATCCAGGCT CTGGCCGATA CGGTGATAAA AACCACGCCG CTCATCCTAA CAGGACTCGC CGTTGGATTT GGTTTCAGAG CAGGGCTATT CAACATAGGA GCGGAAGGAC AGATGATCAT GGGAGGGATT CTGGCAACTG TCGTTGGAAT GCACATGAGA GGAATACCGC CATTACTCGC TATCCCTCTT ACGATGATTG CCGGCATGCT GGGAGGTGCC GTCTGGGCCT CTATAGCCGG TTATCTGAAG GCAAAAACGG GAGCACACGA AGTTGTGTCA ACCATAATGC TGAACTGGAT TGCAACCTAC ATATCCTCCT ACCTCATCAC GGGACCACTG GCAGTGGGAT CGGGTACCCC AAAAAGCCCA GAAATTGCTC CTTCTGCCAA ACTTCCTCCT ATTGTTACAG TTGGCGCCTT AGAAATGACC TCCGGTATTC TGATTTCAAT CCTTTCAGCG GTGGTTATAT ACATCGTTCT GGAGAAGACG AAAACTGGCT ATGAGGTGAA AGCAGTTGGA TTCAATCCGT ACGCGGCAGA ATATGGAGGA ATAAACATCT CAAAGAACAT CGTCATGTGT ATGGCAATAA GCGGAGCGCT GGCGGGTCTT GCTGGAGCCC TGGAAGTGAT GGGGTTACAT CACAGGTTCC TAGGAACACT CTCCGGCGGA AAGGGCTTCG ATGGAATCTC GATCGCGCTG ATCGGACAAA ACCATCCCAT AGGCATCATC TTCGCCTCAT TTCTCATAGC TGCTCTGCGA ACTGGATCGA GCAACATGCA GTTCGTTGGG GTACCAAAAC ACATCGTCAC AATCATACAG GGTATCGTCA TATTCCTCGT CGCAGCCGAC AGGATTGTTA AAACCCTTCT CAGGTTCAGG AAGGTGAAAA GATGA
|
Protein sequence | MNNRVWSFLV PFFSVIIALL IAAVVIILIG QNPVIAYKAM IEGAFGNIQA LADTVIKTTP LILTGLAVGF GFRAGLFNIG AEGQMIMGGI LATVVGMHMR GIPPLLAIPL TMIAGMLGGA VWASIAGYLK AKTGAHEVVS TIMLNWIATY ISSYLITGPL AVGSGTPKSP EIAPSAKLPP IVTVGALEMT SGILISILSA VVIYIVLEKT KTGYEVKAVG FNPYAAEYGG INISKNIVMC MAISGALAGL AGALEVMGLH HRFLGTLSGG KGFDGISIAL IGQNHPIGII FASFLIAALR TGSSNMQFVG VPKHIVTIIQ GIVIFLVAAD RIVKTLLRFR KVKR
|
| |