Gene Tpet_0820 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpet_0820 
Symbol 
ID5170511 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermotoga petrophila RKU-1 
KingdomBacteria 
Replicon accessionNC_009486 
Strand
Start bp832369 
End bp833403 
Gene Length1035 bp 
Protein Length344 aa 
Translation table11 
GC content50% 
IMG OID640563339 
Productinner-membrane translocator 
Protein accessionYP_001244415 
Protein GI148269955 
COG category[R] General function prediction only 
COG ID[COG4603] ABC-type uncharacterized transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACAACA GGGTGTGGTC ATTTCTTGTC CCGTTCTTTT CGGTCATCAT AGCACTTCTT 
ATAGCAGCCG TGGTGATCAT TCTGATCGGG CAGAACCCCG TGATAGCGTA CAAAGCCATG
ATCGAAGGGG CTTTCGGAAA TATCCAGGCT CTGGCCGATA CGGTGATAAA AACCACGCCG
CTCATCCTAA CAGGACTCGC CGTTGGATTT GGTTTCAGAG CAGGGCTATT CAACATAGGA
GCGGAAGGAC AGATGATCAT GGGAGGGATT CTGGCAACTG TCGTTGGAAT GCACATGAGA
GGAATACCGC CATTACTCGC TATCCCTCTT ACGATGATTG CCGGCATGCT GGGAGGTGCC
GTCTGGGCCT CTATAGCCGG TTATCTGAAG GCAAAAACGG GAGCACACGA AGTTGTGTCA
ACCATAATGC TGAACTGGAT TGCAACCTAC ATATCCTCCT ACCTCATCAC GGGACCACTG
GCAGTGGGAT CGGGTACCCC AAAAAGCCCA GAAATTGCTC CTTCTGCCAA ACTTCCTCCT
ATTGTTACAG TTGGCGCCTT AGAAATGACC TCCGGTATTC TGATTTCAAT CCTTTCAGCG
GTGGTTATAT ACATCGTTCT GGAGAAGACG AAAACTGGCT ATGAGGTGAA AGCAGTTGGA
TTCAATCCGT ACGCGGCAGA ATATGGAGGA ATAAACATCT CAAAGAACAT CGTCATGTGT
ATGGCAATAA GCGGAGCGCT GGCGGGTCTT GCTGGAGCCC TGGAAGTGAT GGGGTTACAT
CACAGGTTCC TAGGAACACT CTCCGGCGGA AAGGGCTTCG ATGGAATCTC GATCGCGCTG
ATCGGACAAA ACCATCCCAT AGGCATCATC TTCGCCTCAT TTCTCATAGC TGCTCTGCGA
ACTGGATCGA GCAACATGCA GTTCGTTGGG GTACCAAAAC ACATCGTCAC AATCATACAG
GGTATCGTCA TATTCCTCGT CGCAGCCGAC AGGATTGTTA AAACCCTTCT CAGGTTCAGG
AAGGTGAAAA GATGA
 
Protein sequence
MNNRVWSFLV PFFSVIIALL IAAVVIILIG QNPVIAYKAM IEGAFGNIQA LADTVIKTTP 
LILTGLAVGF GFRAGLFNIG AEGQMIMGGI LATVVGMHMR GIPPLLAIPL TMIAGMLGGA
VWASIAGYLK AKTGAHEVVS TIMLNWIATY ISSYLITGPL AVGSGTPKSP EIAPSAKLPP
IVTVGALEMT SGILISILSA VVIYIVLEKT KTGYEVKAVG FNPYAAEYGG INISKNIVMC
MAISGALAGL AGALEVMGLH HRFLGTLSGG KGFDGISIAL IGQNHPIGII FASFLIAALR
TGSSNMQFVG VPKHIVTIIQ GIVIFLVAAD RIVKTLLRFR KVKR