| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpet_0819 |
|---|
| Symbol | |
|---|
| ID | 5170545 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermotoga petrophila RKU-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009486 |
|---|
| Strand | - |
|---|
| Start bp | 831413 |
|---|
| End bp | 832372 |
|---|
| Gene Length | 960 bp |
|---|
| Protein Length | 319 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 640563338 |
|---|
| Product | inner-membrane translocator |
|---|
| Protein accession | YP_001244414 |
|---|
| Protein GI | 148269954 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1079] Uncharacterized ABC-type transport system, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAATAC TGGAAGTGCT CTGGAACATT TTCTCGAATC CCCTCTTTTA CAAGCTCACT
CTCACAGCTT CCACTCCTCT TCTTTTCGCA TCCCTTGGAG GTGTTTTCAG TGAAGTTACA
GGGGTTGTGA ACATCGCCCT TGAAGGAATA ATGCTCCTTG GAGCGTTTTC TTCGGTGGTG
ATCACATACT ACACCGGAAA CGTGTGGCTC GGTTTCTTGC TTTCCATCCC CATAGGGATC
GGATTTTCCT GGTTCCACGC CTGGGCGAGT ATCAAATGGA GAGGTAACCA GATAGTGAGC
GCGACGGCGT TGATACTGGT CGCGCAGGGT CTGACAGGTT TTCTCATGGA ACCGATATTC
GGTCAGCCGG GGCAGACACC TTATGTGGGT CGAATCGAAG AGATCACACT ACCTGGAATT
TCCTCCATTC CTTTCATCGG AGAAGCCATC GGAACCATCA GTCCAATAGT TCTCATAGCC
TTCGCAATGG TCTTTTTTGC GTGGTTTTTG ATCTACAAGA CCCCACTGGG TCTCAGAATG
AGGGCAGTAG GTGAAAATCC CGAGGCCGCC GATACTCTCG GTGTTGACGT CTTCAAAATA
AGGTACTTCG GAGTTCTCAT GAGCGGTGCT CTGGCGTCCA TGGGAGGAGC GTTCCTTTCC
ATAGGAGAGG TCGGTAACTT CAGGGAACTC ATGACGGGAG GAAGGGGCTT CATTGCCCTT
GCGGCCATGA TCCTTGGAAA TTGGAATCCC ATAGGTGCCA TGTGGGCCTG CCTCATGTTT
GGTATGTCAG AAGCTCTGGC CAATCAACTT CAGAGCAGTC CCATTCTCAA CGTACCCGCT
ACGGCAAAAC CGTTGTTCAA TCTCTTTCCG TTCGTTGTTA CCCTCGTTGT CGTGGCTGGC
CTGATAGGAA GAACTAGACC ACCAGCAGCC GATGGTGTTC CCTATGAAAA AGAAGAGTAA
|
|---|
| Protein sequence | MKILEVLWNI FSNPLFYKLT LTASTPLLFA SLGGVFSEVT GVVNIALEGI MLLGAFSSVV
ITYYTGNVWL GFLLSIPIGI GFSWFHAWAS IKWRGNQIVS ATALILVAQG LTGFLMEPIF
GQPGQTPYVG RIEEITLPGI SSIPFIGEAI GTISPIVLIA FAMVFFAWFL IYKTPLGLRM
RAVGENPEAA DTLGVDVFKI RYFGVLMSGA LASMGGAFLS IGEVGNFREL MTGGRGFIAL
AAMILGNWNP IGAMWACLMF GMSEALANQL QSSPILNVPA TAKPLFNLFP FVVTLVVVAG
LIGRTRPPAA DGVPYEKEE
|
|---|
| |