Gene Tpet_0785 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpet_0785 
Symbol 
ID5171083 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermotoga petrophila RKU-1 
KingdomBacteria 
Replicon accessionNC_009486 
Strand+ 
Start bp798200 
End bp798892 
Gene Length693 bp 
Protein Length230 aa 
Translation table11 
GC content47% 
IMG OID640563304 
Productindole-3-glycerol-phosphate synthase 
Protein accessionYP_001244380 
Protein GI148269920 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0134] Indole-3-glycerol phosphate synthase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGATCGTTC AAAGAAGAAA CCACAGATTT CTGGAGGTTC TGTCGGGAAA AGAGAAAGTA 
AAGATCATAG CGGAATTCAA GAAGGCTTCT CCATCTGCTG GAGATATAAA CGCTGATGCT 
TCTCTGGAAT ATTTCATAAG GATGTACGAC GAGCTGGTGG ATGCGATCAG CATCCTCACG 
GAAAAGCATT ATTTCAAAGG AGATATTTCT TTCGTAAAAG CAGCGAGGGC CTTGACCTGC 
AGACCCATTC TCGCTAAGGA CTTCTACATA GACAAGGTCC AGGTGAAACT GGCTTCCAGT 
GTGGGAGCAG ACGCCGTTCT TATTATCGCC CGAATACTCA CTGCAGAGCA GATAAAAGAG 
ATCTATGAAG CGGCGGAAGA GCTCGGAATG GACAGTCTCG TAGAAGTCCA CTCCAGAGAA 
GATCTGGAGA AGGTCTTTTC GGTGATCAGA CCGAAGATAA TCGGTATCAA CACGAGAGAT 
CTGGACACTT TCGAGATAAG GAAGAATGTG CTGTGGGAAC TTCTACCACT CGTGCCGGAT 
GATACGGTTG TGGTCGCTGA AAGTGGCATA AAAGATCCCA GAGAACTCAA GGATCTGCGG 
GGGAAGGTGA ACGCTGTTCT CGTTGGTACA TCCATCATGA AAGCCGAGAA TCCAAGAAGA 
TTTCTGGAAG AGATGAGAGC ATGGTCAGAG TGA
 
Protein sequence
MIVQRRNHRF LEVLSGKEKV KIIAEFKKAS PSAGDINADA SLEYFIRMYD ELVDAISILT 
EKHYFKGDIS FVKAARALTC RPILAKDFYI DKVQVKLASS VGADAVLIIA RILTAEQIKE 
IYEAAEELGM DSLVEVHSRE DLEKVFSVIR PKIIGINTRD LDTFEIRKNV LWELLPLVPD 
DTVVVAESGI KDPRELKDLR GKVNAVLVGT SIMKAENPRR FLEEMRAWSE